DRSC/TRiP Functional Genomics Resources

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Protein Alignment rnf145b and Rnf145

DIOPT Version :9

Sequence 1:NP_956057.1 Gene:rnf145b / 327056 ZFINID:ZDB-GENE-030131-5264 Length:685 Species:Danio rerio
Sequence 2:NP_001350095.1 Gene:Rnf145 / 74315 MGIID:1921565 Length:663 Species:Mus musculus


Alignment Length:631 Identity:529/631 - (83%)
Similarity:574/631 - (90%) Gaps:16/631 - (2%)


- Green bases have known domain annotations that are detailed below.


Zfish     1 MAMKARLESVLNVGLRIPSIMLLEVLYRWDVSSFFQKIQRSSLNNNPVFQYKYIALYLHYVGYIL 65
            ||.|.:||:||||.||:||||||:||||||||||||:||||||||||:|||||:||.:|||||||
Mouse     1 MAAKEKLEAVLNVALRVPSIMLLDVLYRWDVSSFFQQIQRSSLNNNPLFQYKYLALNMHYVGYIL 65

Zfish    66 SLVLLTLPRQHLVQLYLYVLTALLLFAGHQLSRDYVRGELDSGYEGPLYLEPLSMNRFTTALIGQ 130
            |:||||||||||||||||.:|||||:||||:||||||.||:|.||||:|||||||||||||||||
Mouse    66 SVVLLTLPRQHLVQLYLYFVTALLLYAGHQISRDYVRSELESAYEGPMYLEPLSMNRFTTALIGQ 130

Zfish   131 VVVCTLCSCVMQTRQIWLFSAHLLPLVARLCLVPLETIVFINRFAMIFTGLEVLYFIASNLLVPY 195
            :||||||||||:|:||||||||:|||:||||||||||||.||:|||||||||||||:.|||||||
Mouse   131 LVVCTLCSCVMKTKQIWLFSAHMLPLLARLCLVPLETIVIINKFAMIFTGLEVLYFLGSNLLVPY 195

Zfish   196 NLAKTAYRELVQVVEVYGLLALGMSLWNQLVLPVLFMCFWLVLFALQIYTYFSTRDQPPSRERLL 260
            ||||:||||||||||||||||||||||||||:|||||.|||||||||||:||||||||.||||||
Mouse   196 NLAKSAYRELVQVVEVYGLLALGMSLWNQLVVPVLFMVFWLVLFALQIYSYFSTRDQPASRERLL 260

Zfish   261 FLFLTSIAECCSTPYSLLGLVFTVSFVALGVLTLCKFYLQGYRAFMNDNAMHRGMTEGITLLILA 325
            ||||||||||||||||||||||||||||||||||||||||||||||||.||:||||||:||||||
Mouse   261 FLFLTSIAECCSTPYSLLGLVFTVSFVALGVLTLCKFYLQGYRAFMNDPAMNRGMTEGVTLLILA 325

Zfish   326 VQTGLIELQVIHRAFLLSIILFIVVASILQSMLEIADPIVLALGASRDKSLWKHFRAVSLCLFLL 390
            ||||||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   326 VQTGLIELQVVHRAFLLSIILFIVVASILQSMLEIADPIVLALGASRDKSLWKHFRAVSLCLFLL 390

Zfish   391 VFPAYMAYMICQFFRMDFWLLIIISSSILTSLQVLGTLLIYVLFMVEEFRKAPVENMDEVIYYVN 455
            ||||||||||||||.|||||||||||||||||||||||.||||||||||||.||||||:||||||
Mouse   391 VFPAYMAYMICQFFHMDFWLLIIISSSILTSLQVLGTLFIYVLFMVEEFRKEPVENMDDVIYYVN 455

Zfish   456 GTYRLLEFLVAVCVVAYGVSETLFGEWTVMGSTIILVHSYYNVWLRAQLGWQSFLLRRDAVHKIQ 520
            ||||||||:||:||||||||||:|||||||||.||.:||||||||||||||:|||||||||:||:
Mouse   456 GTYRLLEFVVALCVVAYGVSETIFGEWTVMGSMIIFIHSYYNVWLRAQLGWKSFLLRRDAVNKIK 520

Zfish   521 SMPTASTLQLQQHNDICSICFQDMKSAVITPCSHFFHAACLKKWLYVQETCPLCHGQLKSQLQPT 585
            |:|.|:..||::|||||:||:|||||||||||||||||.|||||||||:||||||..||:..|  
Mouse   521 SLPVATQEQLEKHNDICAICYQDMKSAVITPCSHFFHAGCLKKWLYVQDTCPLCHCHLKNSSQ-- 583

Zfish   586 SSPGTPTQGTPAANQNPREVEQE---QRQPQVE-------LNTEEG 621
                .|..||.||.|.|...||.   |..|:..       ..|:||
Mouse   584 ----LPGLGTEAAPQPPAGAEQNIVLQEGPEPPDHESPPGTGTQEG 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rnf145bNP_956057.1 TRC8_N 8..506 CDD:290425 451/497 (91%)
zf-RING_2 535..575 CDD:290367 35/39 (90%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 582..685 15/50 (30%)
Rnf145NP_001350095.1 TRC8_N 8..506 CDD:372682 451/497 (91%)
YLYF motif. /evidence=ECO:0000269|PubMed:29374057 81..84 2/2 (100%)
HRD1 <520..627 CDD:227568 61/112 (54%)
RING-H2_RNF145 533..575 CDD:319598 37/41 (90%)
RING-H2 finger (C3H2C3-type) 537..574 CDD:319598 32/36 (89%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 587..663 13/39 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C193143183
Domainoid 1 1.000 914 1.000 Domainoid score I535
eggNOG 1 0.900 - - E1_COG5243
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1069 1.000 Inparanoid score I1993
OMA 1 1.010 - - QHG46488
OrthoDB 1 1.010 - - D897451at2759
OrthoFinder 1 1.000 - - FOG0006288
OrthoInspector 1 1.000 - - otm30148
orthoMCL 1 0.900 - - OOG6_109881
Panther 1 1.100 - - O PTHR22763
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4575
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 1 1.500 - -
1616.270

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