DRSC/TRiP Functional Genomics Resources

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Protein Alignment rnf145b and sip3

DIOPT Version :9

Sequence 1:NP_956057.1 Gene:rnf145b / 327056 ZFINID:ZDB-GENE-030131-5264 Length:685 Species:Danio rerio
Sequence 2:NP_001263152.1 Gene:sip3 / 43747 FlyBaseID:FBgn0039875 Length:626 Species:Drosophila melanogaster


Alignment Length:405 Identity:92/405 - (22%)
Similarity:162/405 - (40%) Gaps:114/405 - (28%)


- Green bases have known domain annotations that are detailed below.


Zfish   262 LFLTSIAECCSTPYSLLGLVF-------------TVSFVALGVL-------------TLCKFYLQ 300
            |.|:|:  |.:...:::|..:             |.|..::||:             .|.|.:|.
  Fly     3 LLLSSV--CMALTSAVIGFAYYQKQQFYPAVVYITKSNASMGVIYIQFFVIVFMFGKLLSKIFLG 65

Zfish   301 GYRAFMNDNAMHR---GMTE---GITLL-------ILAVQTGLIELQVIH-----------RAFL 341
            ..||...::.:.|   .:||   ..|:.       .:|:.|.|:.|:..|           |:.:
  Fly    66 TLRAAEFEHLLERFWYALTETCLAFTVFRDDFNPRFVALFTVLLFLKSFHWLAEERVDFMERSPV 130

Zfish   342 LSIILFIVVASILQSMLEIADPIVLALGASRDKSLWKHFRAVSLCLFLLVFPAYMAYMI----CQ 402
            |..:..|.|.|:| ::|.|.|                         ::|:..||.:.::    .|
  Fly   131 LGWLFHIRVGSLL-TVLGILD-------------------------YVLLIHAYNSTLVRGPTVQ 169

Zfish   403 F-FRMDFWLLIIISSSILTSLQVLGTLLIYVLFMVEEFRKAPVENMDEVIYY---VNGTYRLLEF 463
            . |..::.:|:.:.:|         |.:.|||...|.....|.||....:.|   |.|..:::.:
  Fly   170 LVFGFEYAILLTVIAS---------TAIKYVLHAAEMRTDTPWENKAVFLLYTELVIGLIKVVLY 225

Zfish   464 LVAVCVVAYGVSETLFGEWTVMGSTIILVHSYYNVWLRAQLGWQSFLLRRDAVHKIQSM-PTAST 527
            ::.|.::|...:..:|    |.......:.::     |..|  ...::.|.|:..:.:: |.|:.
  Fly   226 ILFVVIMAKIYALPMF----VFRPMFFTIRNF-----RKAL--NDVIMSRRAIRNMNTLYPDATP 279

Zfish   528 LQLQQHNDICSICFQDM-KSAVITPCSHFFHAACLKKWLYVQETCPLCHGQLKSQLQPT-SSPGT 590
            .:|:|.::||.||.:|| ..:...||.|.||..||:.|...|:|||.|  :|.....|| :|...
  Fly   280 EELRQSDNICIICREDMVNHSKKLPCGHIFHTTCLRSWFQRQQTCPTC--RLNILRTPTVNSTAM 342

Zfish   591 PTQG---TPAANQNP 602
            |.||   ..||..||
  Fly   343 PRQGDEAVAAAAGNP 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rnf145bNP_956057.1 TRC8_N 8..506 CDD:290425 56/301 (19%)
zf-RING_2 535..575 CDD:290367 18/40 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 582..685 10/25 (40%)
sip3NP_001263152.1 HRD1 20..>365 CDD:227568 87/386 (23%)
zf-RING_2 287..328 CDD:290367 19/42 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590377
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5243
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D897451at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.750

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