DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment baz and pdzd3b

DIOPT Version :9

Sequence 1:NP_001036283.1 Gene:baz / 32703 FlyBaseID:FBgn0000163 Length:1520 Species:Drosophila melanogaster
Sequence 2:NP_001124259.1 Gene:pdzd3b / 566852 ZFINID:ZDB-GENE-081022-151 Length:524 Species:Danio rerio


Alignment Length:486 Identity:95/486 - (19%)
Similarity:159/486 - (32%) Gaps:161/486 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   329 KDGEMLLIINE-----------YGSPLGLTALPDK------------------------------ 352
            |||:.||.:||           .||.:....|.:|                              
Zfish    87 KDGDRLLEVNEAFVENLEHTEVSGSQICFLVLDEKAYEQVVSEGRDLREMAKAARGEGWRPPHLC 151

  Fly   353 -----EHGGGLLVQHVE-----------PGSRAERGRLRRDDRILEINGIKLIGLTESQVQEQLR 401
                 .||.|..:..||           .|..|||..:|:.|.::.|:|.....||.|.:.:.::
Zfish   152 HIRKDAHGMGFNILPVEGEKRKFAVSPVKGGAAERAGVRKGDHLIWIDGAMASELTHSAISKMVK 216

  Fly   402 RALESSELRVRVLRGDRNRRQQRDSKVAEMVEVATVSPTRKPHAAPVGTSLQVANTRKLG-RKIE 465
            :.  ||.:.|.|:..|..:...|                ||....|.     :|:...:. |...
Zfish   217 KC--SSHMTVLVIDSDTEKSYAR----------------RKMPILPA-----MADAENMPYRPQR 258

  Fly   466 IMLKKGPNGLGFSVTTRDNPAGGHCPIYIKNILPRGAAIEDGRLKPGDRLLEVDGTPMTGKTQTD 530
            :.|..||:|.||.:  |....|....:::...:.:|:..|.|.:|.|:.||||:|......:..|
Zfish   259 LHLVMGPDGYGFLL--RQEKGGAGRTVHMVREVDKGSPAELGGVKEGEMLLEVNGESTDPLSHKD 321

  Fly   531 VVAILRGMPAGATVRIVVSRQQELAEQADQPAEKSAGVAVAPSVAPPA---VPAAAAPAPPIPVQ 592
            ||:.:|  .:|..|.:.....|...................||..|..   :|....||.| ||:
Zfish   322 VVSNIR--QSGQQVTLTTMTPQGYDFYTKLGLSPLLFCVDVPSALPEVKKEIPVTPKPAVP-PVE 383

  Fly   593 KSSSARSLFTHQQQSQLNESQHFIDAGSESAASNDSLPPSSNSWHSREELTLHIPVHDTEKAGLG 657
            .          |::.|:|.:                               :...:.:...||.|
Zfish   384 P----------QEEVQINPN-------------------------------VRRCILERSSAGFG 407

  Fly   658 VSVKGKTCSNLNASGSSASSGSNGLMKHDGDLGIFVKNVIHGGAASRDGRLRMNDQLLSVNGVSL 722
            ..:                    |.::...  |.|:..|..|......| |...|.::.|||.::
Zfish   408 FHL--------------------GCVQQKP--GTFISQVAAGSPGQSSG-LFQGDVVVEVNGQNV 449

  Fly   723 RGQNNAEAMETLRRAMVNTPGKHPGTITLLV 753
            ..::..:.:..::|.     |:   |::|||
Zfish   450 EKESLEDVIMHVKRG-----GE---TLSLLV 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bazNP_001036283.1 DUF3534 <62..174 CDD:288873
PDZ_signaling 341..412 CDD:238492 22/116 (19%)
CRS1_YhbY <390..>436 CDD:294440 9/45 (20%)
PDZ_signaling 462..548 CDD:238492 25/85 (29%)
PDZ_signaling <686..753 CDD:238492 14/66 (21%)
pdzd3bNP_001124259.1 PDZ_signaling 44..118 CDD:238492 9/30 (30%)
PDZ 148..227 CDD:214570 19/80 (24%)
PDZ_signaling 264..336 CDD:238492 23/75 (31%)
PDZ 393..473 CDD:214570 20/142 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.