DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment baz and pard3bb

DIOPT Version :9

Sequence 1:NP_001036283.1 Gene:baz / 32703 FlyBaseID:FBgn0000163 Length:1520 Species:Drosophila melanogaster
Sequence 2:XP_690638.6 Gene:pard3bb / 562146 ZFINID:ZDB-GENE-070912-290 Length:1172 Species:Danio rerio


Alignment Length:1510 Identity:355/1510 - (23%)
Similarity:560/1510 - (37%) Gaps:486/1510 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 DSWVTVTHLQ-TQSGILDPDDCVRDVADDREQILAHFDDPGPDP--GVPQGGGDGASGSSSVGTG 124
            |..|...|:: ...|||||||.:.|:.:|:::::|.:::.....  .:..|.|.||. ||..|..
Zfish    42 DFLVRTHHVEYCDGGILDPDDVLTDLVEDKDKLIAVYEEQEAQQRGAMSPGNGSGAR-SSLTGQS 105

  Fly   125 SPDIFRDPTNTEAPTCPRDLSTPHIEVTST---TSGPMAGLGVGLMVRRSSDPNLLASLKAEGSN 186
            ||    :|.::|. .|.:.:....|||||:   :|.|       |:||.|||..|.|| :.|..|
Zfish   106 SP----EPYDSEL-ACFQPIKGGEIEVTSSALKSSTP-------LLVRSSSDSALGAS-QMEDMN 157

  Fly   187 KRWSAAAPHYAGGDSPERLFLDKAGGQLSPQWEEDDDPSHQLKEQLLHQQQPHAANGGSSSGNHQ 251
            .|  |...|.                      :.|.|.:.:|                  :||  
Zfish   158 SR--AMGIHV----------------------QTDMDFTAEL------------------TGN-- 178

  Fly   252 PFARSGRLSMQFLGDGNGYKWMEAAEKLQNQPPAQQTYQQGSHHAGHGQNGAYSSKSLPRESKRK 316
               :||.|:      .|..|.:|.:                      |:.|              
Zfish   179 ---KSGPLT------SNLTKTVEIS----------------------GEQG-------------- 198

  Fly   317 EPLGQAYESIREKDGEMLLIINEY-----GSPLGLTALPDKEHGGGLLVQHVEPGSRAERGRLRR 376
             |||              :.:..|     |.||||       |     ::.||..||::|..:.:
Zfish   199 -PLG--------------IHVVPYCSSLSGRPLGL-------H-----IRGVEENSRSKREGIFQ 236

  Fly   377 DDR-ILEINGIKLIGLTESQVQEQLRRALESSELRVRVLRGDRNRRQQRD--------------- 425
            ||. |::||..:|:..:.||.||..|:|:.||.:|:.|:......|.::.               
Zfish   237 DDECIVKINDTELMDKSFSQAQEIFRQAMRSSIVRLEVVPVFNKERFEKSVISHLFNPETPDASA 301

  Fly   426 -------SKVAEMVEVA----------------------------TVSPTRKPHAA-------PV 448
                   .||..||...                            .:|||.:..:|       .:
Zfish   302 QTKEPPPLKVKPMVRPVESSSGWQAEFQESSSSLESRSLGSPLPINLSPTPRGKSAESSLLKNSL 366

  Fly   449 GTSLQVANTRKLGRKIEIMLKKGPNGLGFSVTTRDNPAGGHCPIYIKNILPRGAAIEDGRLKPGD 513
            |.|....:.:|.|:::.|.|||||.||||:|.|||:...|..||.:|||||||||::||||:.||
Zfish   367 GPSPLQNHNKKGGKRLRIDLKKGPEGLGFTVVTRDSSVHGPGPILVKNILPRGAAVKDGRLQSGD 431

  Fly   514 RLLEVDGTPMTGKTQTDVVAILRGMPAGATVRIVVSRQQELAEQADQPAEKSAGVAVAPSVAPPA 578
            |:|||:|..:.|::|.::||:||....|.:|.:||:||:::.    .|.|               
Zfish   432 RILEVNGVDIGGRSQEELVAMLRSTKQGDSVCLVVARQEDMF----LPRE--------------- 477

  Fly   579 VPAAAAPAPPIPVQKSSSARSLFTHQQQSQLNESQHFIDAGSESAASNDSLPPSSNSWHSREELT 643
                         .|...||.|.:.:                                 .:|:|.
Zfish   478 -------------LKEEQARLLLSEE---------------------------------GKEQLM 496

  Fly   644 LHIPVHDTEKAGLGVSVKGKTCSNLNASGSSASSGSNGLMKHDGDLGIFVKNVIHGGAASRDGRL 708
            ..:|::|:..||||||:||         ..|..:|.        |||||:|::||||||.:||||
Zfish   497 FEVPLNDSGSAGLGVSLKG---------NKSRETGE--------DLGIFIKSIIHGGAAFKDGRL 544

  Fly   709 RMNDQLLSVNGVSLRGQNNAEAMETLRRAMVNTPGKHPGTITLLVGRKILRSASSSDILDHSNSH 773
            |:||||::|||..|.|::|.||||||||:| :..|...|.|.|:|.|.:|..       :.....
Zfish   545 RINDQLIAVNGEPLLGKSNHEAMETLRRSM-SMEGNLRGMIQLVVLRSVLPP-------NQEFQE 601

  Fly   774 SHSHSNSSGGSNSNGSGNNNNSSSNASDNSGATVIYLSPEKREQRC---NGGGGGGSAGNEMNRW 835
            :....|.|..|....:.:.:.|.:..........||       :||   |||......|::....
Zfish   602 ARRILNRSFDSCVGQAAHLSQSDAGVQPPMVMNSIY-------ERCAVSNGGYNHTEEGDDEGFD 659

  Fly   836 SNPVLDR--------LTGGICSSN-SAQPSSQQSHQQQPHPSQQQQQQRRLPAAPVCSSAALRNE 891
            :||....        |:.|:.|:: |.....||.|.:|.|       .:.|.:..:.|...:...
Zfish   660 ANPHRQNSLQFQQSLLSSGLRSADASLTDGGQQVHAEQNH-------VKSLKSVDLVSGGVVLGP 717

  Fly   892 SYYMATNDNWSPAQMHLMTAHGNTALLIEDDAEPMSPTLPARPH--DGQHCNTSSANPSQNLAVG 954
            :..:..:.:....|..:..|..|..|          |....|||  .|:.||.|.     ..|:.
Zfish   718 TLGLKKSSSLESLQTAMTEAKKNELL----------PFHRPRPHIVRGRGCNESF-----RAAID 767

  Fly   955 N--QGPPINTVPGTPSTSSNFDATYSSQLSLETNSGVEHFSRDALGRRSISEKHHAALDARETGT 1017
            .  .|||.:........||..|...|..            ||...|....::|     |.::...
Zfish   768 KSYDGPPEDDDDEGSEQSSGRDTPASGS------------SRQGAGDNEENKK-----DKKKKAK 815

  Fly  1018 YQRNKKLREE-RERERRIQLTKSAVYGGSIESLTARIASANAQFSGYKHAKTASSIEQRETQQQL 1081
            .::.:|::.: :|:|::    ||...|..::..|.:......:|...|..|:     :.||:.. 
Zfish   816 SKKKEKMKSKGKEKEKK----KSEEVGDELDKKTKKKGFGLLRFGKKKEEKS-----KPETKVN- 870

  Fly  1082 AAAEAEARDQLGDLGPSLGMKKSSSL---ESLQTMVQELQMSDEPRGHQALRAPRGRGREDSLRA 1143
                              .:|:::.:   |.|:.|.:|.:..:..  ||.||..:||.|      
Zfish   871 ------------------ALKQTTEILSEEELERMKEERERIEAK--HQELRERQGRDR------ 909

  Fly  1144 AVVSEPDASKPRKTWLLEDGDHEGGFASQRNGPFQSSLNDGKHGCKSSRAKKPSILRGIGHMFRF 1208
              .|.||         |||.|.:..:|...|...:.|.:...:|.:|...::|  |..:.|    
Zfish   910 --FSPPD---------LEDDDLDPNYARINNFKERGSPSQPLYGNRSPSPQRP--LAPVSH---- 957

  Fly  1209 GKNRKDGVV-PVDNYAVNI----SPPTSVVSTATSPQLQQQQQQQLQQHQQQQQIPTAALAALER 1268
              :|:.... |:|.....:    |||.....::.. ::||.:::.||               ..|
Zfish   958 --SREPSTEDPLDGLYAKVNKQRSPPPPAADSSMD-RIQQLRREYLQ---------------ARR 1004

  Fly  1269 NGKPPAYQPPPPLPAPNGVGSNGIHQNDIFNHRYQHYANYEDLHQQHQQHQISGGDSTTSISETL 1333
            .|..|||.   .|.|......:..|:..:.|...:....|||:.:|:..                
Zfish  1005 EGTAPAYD---ELEARRRGAEHDPHRMPMRNPDPRLAPRYEDVERQYAS---------------- 1050

  Fly  1334 SESTLECMRQQVIRQRIKVEAESRRHQHYHSQRSARSQDVSMHSTSSGSQPGSLAQPQAQSNGVR 1398
                            :...|.:..:::...|.||..:.....:..||..||  ..|..:....|
Zfish  1051 ----------------LPRRAPADPNEYPVQQWSAHREPAQYPNPQSGYHPG--YPPPPREAYPR 1097

  Fly  1399 PMSSYYE----YETVQQQRVGSIKHSHSSSATSSSSSPINVPHWKAAAMNGYSPAS--------- 1450
            |:.....    |..:.||| |.::.....|.|    .||..|.:...:..||...|         
Zfish  1098 PLDPRQGDAGFYHPLPQQR-GPLRQDVPPSPT----IPIRGPRFDTMSRGGYRNTSPERYAYGDQ 1157

  Fly  1451 LNSSARSRGPFVTQV 1465
            .:|..|.:.|....|
Zfish  1158 RHSDPRQKSPMTAAV 1172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bazNP_001036283.1 DUF3534 <62..174 CDD:288873 37/116 (32%)
PDZ_signaling 341..412 CDD:238492 26/71 (37%)
CRS1_YhbY <390..>436 CDD:294440 15/95 (16%)
PDZ_signaling 462..548 CDD:238492 45/85 (53%)
PDZ_signaling <686..753 CDD:238492 40/66 (61%)
pard3bbXP_690638.6 DUF3534 1..145 CDD:288873 36/115 (31%)
PDZ 188..276 CDD:214570 35/150 (23%)
PDZ_signaling 387..467 CDD:238492 44/79 (56%)
PDZ_signaling 497..589 CDD:238492 52/109 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 79 1.000 Domainoid score I8594
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D387987at33208
OrthoFinder 1 1.000 - - FOG0002688
OrthoInspector 1 1.000 - - otm26103
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2708
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.950

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