DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment baz and Grip

DIOPT Version :9

Sequence 1:NP_001036283.1 Gene:baz / 32703 FlyBaseID:FBgn0000163 Length:1520 Species:Drosophila melanogaster
Sequence 2:NP_572285.2 Gene:Grip / 50391 FlyBaseID:FBgn0029830 Length:1058 Species:Drosophila melanogaster


Alignment Length:1421 Identity:274/1421 - (19%)
Similarity:443/1421 - (31%) Gaps:537/1421 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 KRWSAAAPHYAGGDSPERLFLDKAGGQLSPQWEEDDDPSHQLK-EQLLHQQQPHAANGGSSSGNH 250
            |.|.:..|  .||..|.:                    |..|| :|...|||...::..|.:|:|
  Fly     2 KLWKSKKP--IGGCVPGK--------------------SAALKQDQQQQQQQQQESHNNSFNGHH 44

  Fly   251 QP---FARSGRLSMQFLGDGNGYKWMEAAEKLQNQPPAQQTYQQGSHHAGHG--QNGAYSSKSLP 310
            .|   .|.:..||:.                 :...|||      |..:|..  :...|::.:||
  Fly    45 HPPTDTALAPMLSVD-----------------RAMSPAQ------SEDSGLAPERGTTYATITLP 86

  Fly   311 RESKRKEPLGQAYESIREKDGEMLLIINEYGSPLGLTALPDKEHGGGLLVQHVEPGSRAERGRLR 375
            |.:     |..|.......|.....::... :|:|        |....|.    ||         
  Fly    87 RNA-----LHLAITFAERNDLSYPPVVGSL-NPVG--------HAADFLA----PG--------- 124

  Fly   376 RDDRILEINGIKLIGLTESQVQEQLRRALESSELRVRVLRGDRNRRQQRDSKVAEMVEVATVSPT 440
              ||:.:|:||..|||:..:|...|  ....|:....::            ::...:...|||. 
  Fly   125 --DRLHQIDGISTIGLSNQKVMNML--CAGGSDACPAIV------------EIEYSLPECTVSQ- 172

  Fly   441 RKPHAAPVGTSLQVANTRKLGRKIEIMLKKGPNGLGFSVTTRDNPAGGHCPIYIKNILPRGAAIE 505
                     .||.|  |.||.   :|.:::....||.::.     .|...|:.:.::.|.|...:
  Fly   173 ---------NSLCV--TSKLA---QITVERESGCLGLTLR-----GGADYPLIVTHVRPHGPVYK 218

  Fly   506 DGRLKPGDRLLEVDGTPMTGKTQTDVVAILR--GMPAGATVRIVVSRQQELAEQADQPAEKSAGV 568
            .||:|||||||.||...:.|||..:...|::  |..:|.|         .|..:.|....:|...
  Fly   219 TGRIKPGDRLLRVDNVSLIGKTLAEAQQIIKCGGHVSGYT---------NLTIEYDVSVVQSVEF 274

  Fly   569 AVAPSVAPPAVPAAAAPAPPIPVQKSSSARSLFTHQQQSQLNESQHFIDAGSESAASNDSLPPSS 633
            ::.|.:              |.:::                                        
  Fly   275 SMGPLL--------------IEIER---------------------------------------- 285

  Fly   634 NSWHSREELTLHIPVHDTEKAGLGVSVKGKTCSNLNASGSSASSGSNGLMKHDGDLGIFVKNVIH 698
                         |::|.    ||:.:...|.: :.||||.:|:.|:| .|.:...|:|:.:::.
  Fly   286 -------------PMNDK----LGLVLCNYTAA-VPASGSGSSTPSSG-EKIEESAGVFIASILP 331

  Fly   699 GGAASRDGRLRMNDQLLSVNGVSLRGQNNAEAMETLRRAMVNTPGKHPGTITLLVGRKILRSASS 763
            ...|.|.|.|.:.||:||::             :|:                      |..:|.|
  Fly   332 ASIADRCGALSVGDQVLSID-------------DTM----------------------IEHTAFS 361

  Fly   764 SD----ILDHSNSHSH-------SHSNSSGGSNSNGSGNNNNSS--SNASDNSGATVIYLSPEKR 815
            .|    |||.|....:       :|:.:..|..:.||...:.|:  |..|..:|         ::
  Fly   362 PDEVMTILDTSTGRGYTQMQIMPAHALARRGHTTLGSPKYSFSTLESRKSSTAG---------RQ 417

  Fly   816 EQR-------------CNGGGGGGSAGNEMNRWSNPVLDRLTGGICSSNSAQPSSQQSHQQQPHP 867
            .||             |   |..||.|..|.          ||||..|:|..             
  Fly   418 RQRFARKSSLPLENPAC---GTPGSTGGSMG----------TGGIHGSSSLG------------- 456

  Fly   868 SQQQQQQRRLPAAPVCSSAALRNESYYMATNDNWSPAQMHLMTAHGNTALLIE-------DDAEP 925
                      ....:|     |.||:           .:.|..:||...:|.|       ..|..
  Fly   457 ----------MGLGLC-----RAESF-----------PVLLDCSHGAGIILSETVSGSGGSGAVA 495

  Fly   926 MSPTLPARPHDGQHCNTSSANPSQNLAVGNQGPPINTVPGTPSTSSNFDATYSSQLSLETNSGVE 990
            ::..:|....|...|          :..|::...||.:                           
  Fly   496 IAQIVPDSVADRSGC----------IQAGDRIVAINKM--------------------------- 523

  Fly   991 HFSRDALGRRSISEKHHAALDARETGTYQRNKKLREERERERRIQLTKSAVYGGSIESLTARIAS 1055
             :|.||...|.:.| ..::.:....||.....:|..|.:....: :..|.|:  |::.|.|....
  Fly   524 -YSLDAAAMRQLLE-GGSSRNGASNGTPANWLELEIEFDMPDAV-VPASGVF--SVKLLRAGKCG 583

  Fly  1056 ANAQFSGYKHAKTASSIEQRETQQQLAAAEAEARDQLGDLGPSLGMKKSSSLESLQTMVQELQMS 1120
            .....||..|....                      :.|:.......:|.||.|...:   |.:.
  Fly   584 LGLSVSGSSHGGLV----------------------ISDVKMGSPAHRSGSLRSGDIL---LAVD 623

  Fly  1121 DEPRGH---QALRAPRGRGREDS--------LRAAVVSEPD---ASKPRKTWLLEDGDHEG---G 1168
            ..|..|   .||....||.:..|        |....:..||   .|.|..:.....|.:.|   |
  Fly   624 QHPVQHFNVDALLKEEGRSQNPSHSSSDFTTLTIKRIVLPDFLPMSSPIYSNCPASGINLGMGMG 688

  Fly  1169 FASQRNGPFQSS--LNDGKHG-CKS--SRAKKPSILRGIGHM---------FRFGKNRKDGVVPV 1219
            .::..:....||  :..||:. |.|  ||..:|...| :..|         .|.|.....|    
  Fly   689 VSTSTDHDLYSSAYVTAGKYADCVSLKSRTPQPDYFR-VPSMDDASLQSVQLRSGSGSNGG---- 748

  Fly  1220 DNYAVN-----------ISPPTSVVSTATSPQLQQQQQQQLQQHQQQQQIPTAALAALERNGKPP 1273
             |.|.|           ::||.:...|...|:.:.:|:|....::            |.|.....
  Fly   749 -NQAANSWSTGVNSRSYVAPPNTQSLTTELPEEEDEQEQMYPGYE------------LNRYASVD 800

  Fly  1274 AYQPPPPL-------PAPNGVGSNG--IHQNDIFNHRYQ--------HYANYEDLHQQ------- 1314
            ....|||:       .|.:...|:|  :|| .||..|.:        ..|..||:.:.       
  Fly   801 CTALPPPMENKVYGSAASSSSKSSGSSLHQ-IIFTVRLEPKGGLLGITLAGSEDITKSITISGLV 864

  Fly  1315 -----HQQHQISGGDSTTSISE------TLSESTL------ECMRQQVIRQRIKVEAESRRHQHY 1362
                 |:..||..||...:|.|      .||.:|.      :.:..:::|.              
  Fly   865 EGGIAHKNGQIHVGDQLLAIDEHSVQGMPLSHATSLLQNLGDLVDLKILRS-------------- 915

  Fly  1363 HSQRSARSQDVSMHSTSSGSQPGSLAQPQAQSNGV--RPMSSYYEYETVQQQRVGSIKHSHSSSA 1425
                         |..::||.   |.|.||....|  ||.|.....|..::...|:.....:.:.
  Fly   916 -------------HDLANGSH---LPQTQAIYAKVQRRPRSPSANTEASKESGSGNANGGGAVNG 964

  Fly  1426 TSSSSSP--INVPHWKAAAMNGYSPASLNSSARSRGPFVTQVTIREQSSGGIPAHL 1479
            .|.|..|  .:|..:|....:.|. .|::.....||.|:.::     .||| ||.:
  Fly   965 NSGSGKPRVFHVTLYKDKVYDDYG-FSVSDGLYERGVFINRI-----RSGG-PADM 1013

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bazNP_001036283.1 DUF3534 <62..174 CDD:288873
PDZ_signaling 341..412 CDD:238492 17/70 (24%)
CRS1_YhbY <390..>436 CDD:294440 5/45 (11%)
PDZ_signaling 462..548 CDD:238492 25/87 (29%)
PDZ_signaling <686..753 CDD:238492 11/66 (17%)
GripNP_572285.2 PDZ 82..147 CDD:294084 21/93 (23%)
PDZ_signaling 183..254 CDD:238492 23/75 (31%)
PDZ_signaling 278..375 CDD:238492 34/204 (17%)
PDZ 496..>521 CDD:294084 4/34 (12%)
PDZ_signaling 571..658 CDD:238492 21/113 (19%)
PDZ_signaling 832..913 CDD:238492 16/80 (20%)
PDZ_signaling 973..1055 CDD:238492 12/48 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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