DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment baz and pard3b

DIOPT Version :10

Sequence 1:NP_001036283.1 Gene:baz / 32703 FlyBaseID:FBgn0000163 Length:1520 Species:Drosophila melanogaster
Sequence 2:XP_002936439.2 Gene:pard3b / 496480 XenbaseID:XB-GENE-5816818 Length:1137 Species:Xenopus tropicalis


Alignment Length:1523 Identity:325/1523 - (21%)
Similarity:498/1523 - (32%) Gaps:595/1523 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 KPDSWVTVTHLQTQ-SGILDPDDCVRDVADDREQILAHFDDPGPDPGVPQGGGDGASGSSSVGTG 124
            :|..||.|.||:.| .|||||||.|.||.:|:::|:|.||:               ..:|.:...
 Frog    41 EPGYWVKVHHLEYQDGGILDPDDIVADVVEDKDKIIAVFDE---------------QEASEIKNR 90

  Fly   125 SPDIFRDPTNTEAPTCPRDLSTP---------HIEVTSTTSGPMAGLGVGLMVRRSSDPNLLASL 180
            :.|.......|.......:||..         .|:|||:.    ..:|..|:|||||||.:    
 Frog    91 NEDSVNVIDRTSPDPLEAELSAQLSAFQPLKGEIDVTSSA----LKIGTPLLVRRSSDPTV---- 147

  Fly   181 KAEGSNKRWSAAAPHYAGGDSPERLFLDKAGGQLSPQWEEDDDPSHQLKEQLLHQQQPHAANGGS 245
                    ..|...|.:...|.:               :..:|.|..|...|             
 Frog   148 --------GPAVDFHPSSSQSAD---------------QNVNDASQGLSRVL------------- 176

  Fly   246 SSGNHQPFARSGRLSMQFLGDGNGYKWMEAAEKLQNQPPAQQTYQQGSHHAGHGQNGAYSSKSLP 310
                                                 ||.:||.|                    
 Frog   177 -------------------------------------PPDEQTDQ-------------------- 184

  Fly   311 RESKRKEPLGQAYESIREKDGEMLLIINEYGSPLGLTALP-DKEHGG---GLLVQHVEPGSRAER 371
             .:..::||.:..|..|:.:      |:..|.|||:..:| .....|   ||.::.:|..||::|
 Frog   185 -NTGLQKPLYKIREITRKVE------ISGSGGPLGIHVVPFYSSFSGRALGLYIRGIEESSRSKR 242

  Fly   372 -GRLRRDDRILEINGIKLIGLTESQVQEQLRRALESSELRVRVLRGDRNRRQQR---------DS 426
             |..:.::.|::||.::||..:.:|.|:..|:|::...:.|..:..::....::         |.
 Frog   243 EGLFQENECIVKINNVELIDRSFAQAQDIFRQAMKQQNVLVETVLPEKRELYEKSVISSLFVLDD 307

  Fly   427 KVAEMVEVATVSP-------TRKPHAA----PVGTSLQVA-----------------------NT 457
            .:.|:.::....|       .:.|...    |.||.:|..                       ..
 Frog   308 DIDEVPDIKPPPPPVHVNRSIKMPEQVNGIDPTGTKIQQPPLSPNLISSESKFSSPSLSPLGFGN 372

  Fly   458 RKLGRKIEIMLKKGPNGLGFSVTTRDNPAGGHCPIYIKNILPRGAAIEDGRLKPGDRLLEVDGTP 522
            :|.|:|:.|.|.||..||||:|.|||:...|..||::|||||:|||::||||..|||:|||:|..
 Frog   373 KKNGKKLRIDLTKGAEGLGFTVVTRDSTVHGPGPIFVKNILPKGAAVKDGRLLSGDRILEVNGKD 437

  Fly   523 MTGKTQTDVVAILRGMPAGATVRIVVSRQQELAEQADQPAEKSAGVAVAPSVAPPAVPAAAAPAP 587
            :.||||.::||:||....|.:|.:||:||.|.                                 
 Frog   438 IAGKTQEELVAMLRSTKLGESVSLVVARQDET--------------------------------- 469

  Fly   588 PIPVQKSSSARSLFTHQQQSQLNESQHFIDAGSESAASNDSLPPSSNSWHSREELTLHIPVHDTE 652
                                       |:....:....|...||.:.:     ::|..||::|:.
 Frog   470 ---------------------------FLPRELKGETENLVFPPDNTA-----QMTFEIPLNDSG 502

  Fly   653 KAGLGVSVKGKTCSNLNASGSSASSGSNGLMKHDGDLGIFVKNVIHGGAASRDGRLRMNDQLLSV 717
            .||||:|:||         ..|..:|:        |||||:|::||||||.:|||||:||||::|
 Frog   503 SAGLGISLKG---------NKSRETGA--------DLGIFIKSIIHGGAAFKDGRLRVNDQLVAV 550

  Fly   718 NGVSLRGQNNAEAMETLRRAMVNTPGKHPGTITLLVGRKILRSASSSDILDHSNSHSHSHSNSSG 782
            ||.||.|::|.:|||||||:| :..|...|.|.|::.|::     .....:.|.:...:...:..
 Frog   551 NGESLLGKSNRDAMETLRRSM-SMEGNIRGMIQLVILRRL-----DWQTEERSETFQKNTIENLA 609

  Fly   783 GSNSNGSGNNNNSSSNASDNSGATVIYLSPEKREQRCNGGGGGGSAGNEMNRWSNPVLDRLTGGI 847
            .|..||.......||..:|.:...  |:.|                         |:        
 Frog   610 VSEQNGVQEKLKDSSRFNDRNSEN--YIPP-------------------------PI-------- 639

  Fly   848 CSSNSAQPSSQQSHQQQPHPSQQQQQQRRLPAAPVCSSAALRNESYYMATNDNWSPAQMHLMTAH 912
                            .|||.:.                                          
 Frog   640 ----------------PPHPKEH------------------------------------------ 646

  Fly   913 GNTALLIEDDAEPMSPTLPARPHDGQHCNTSSANPSQNLAVGNQGPPINTVPGTPSTSSNFDATY 977
                :::|      ||.|.                             |.....|:.|.|..|:.
 Frog   647 ----IIVE------SPKLR-----------------------------NVAESQPNDSLNIKASR 672

  Fly   978 SSQL-SLETNSGVEHFSRDALGRRSISEKHHAALDARETGTYQRNKKLREERERERRIQLTKSAV 1041
            |..: :.|:|.|                                  .|||.:             
 Frog   673 SMDIVADESNIG----------------------------------SLREHQ------------- 690

  Fly  1042 YGGSIESLTARIASANAQFSGYKHAKTASSIEQRETQQQLAAAEAEARDQLGDLGPSLGMKKSSS 1106
             .||...                                             |.||.||:|||||
 Frog   691 -SGSPGK---------------------------------------------DFGPRLGLKKSSS 709

  Fly  1107 LESLQTMVQELQMSD----EPRGHQALRAPRGRGREDSLRAAVVSEPDASKPRKTWLLED-GDHE 1166
            ||||||...|::.::    .||.|..    ||||..:|.|||:....|..:..:...|.| ..|.
 Frog   710 LESLQTAFAEVKKNELPFYRPRPHMV----RGRGCNESFRAAIDKSYDGPEGEEEDALSDLSSHS 770

  Fly  1167 GGFASQRNGP---------------FQSSLNDGKHGCKSSRAK----------------KPSILR 1200
            |     |..|               .:|.....|...|..:||                |.:..:
 Frog   771 G-----RESPNSELTPLGNQEMEDTDKSKKEKKKKDVKKEKAKAKGKEKKKKDDAEEHEKKAKKK 830

  Fly  1201 GIGHMFRFGK------NRKDGVVPVDNYAVNISPPTSVVSTATSPQLQQQQQQQL------QQHQ 1253
            |.|.:.|..|      |:|.|.:..:...|...............:|::||.:.|      ...:
 Frog   831 GFGVLGRLIKKKEEKGNQKQGTLKEEENEVEKMKEERERINIKHQELREQQAKNLLGYNWSHDME 895

  Fly  1254 QQQQIPTAAL------AALERNGKPPAYQPPPPLPAPNGVGSNGIHQNDIFNHRYQHYANYEDLH 1312
            .....|..|.      |.|..|...| |.||..|| |:......:    :.:.|...||...  .
 Frog   896 DDDMDPNYAKVNHFQEAPLNHNAHRP-YSPPTTLP-PSYPRETQV----LSSEREDLYAKIN--K 952

  Fly  1313 QQHQQHQISGGDSTTSISETLSESTLECMRQQVIRQRIKVEA--------ESRRHQHY------- 1362
            :|....:...|.||:..::.:.:..:|       ..:.|.|.        |..||..|       
 Frog   953 KQQAPDKSDSGRSTSGTADRIQQLRME-------YHQAKQEGFLMHEDDDELGRHLEYEQTWIPI 1010

  Fly  1363 HSQRSARSQDVSMHSTSSG------SQPGSLAQPQAQSNGVRPMSSYYEYETVQQQRVGSIKHSH 1421
            .|..::|.:...|....:.      .||..:..|....|...| ..||:...:.|...|:...:.
 Frog  1011 RSPEASRLRYDGMERQYASLPRHGPFQPEFMPGPSTGYNEREP-PYYYDVAHITQSPKGAYSQTQ 1074

  Fly  1422 SSSATSSSSSPINVPHWKAAAMNGYSPA 1449
            :....|....|...|..|........|:
 Frog  1075 AHHKASYRIPPYQPPQAKGPIRQDVPPS 1102

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bazNP_001036283.1 Par3_HAL_N_term <62..100 CDD:463446 21/38 (55%)
PDZ1_PDZ3_bazooka-like 330..416 CDD:467154 24/90 (27%)
PDZ2_Par3-like 459..551 CDD:467271 49/91 (54%)
PDZ3_Par3-like 639..756 CDD:467272 53/116 (46%)
pard3bXP_002936439.2 Par3_HAL_N_term 2..83 CDD:463446 22/56 (39%)
PDZ1_Par3-like 195..292 CDD:467178 26/102 (25%)
PDZ2_Par3-like 374..466 CDD:467271 49/91 (54%)
PDZ3_Par3-like 491..588 CDD:467272 53/114 (46%)

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