DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment baz and Patj

DIOPT Version :9

Sequence 1:NP_001036283.1 Gene:baz / 32703 FlyBaseID:FBgn0000163 Length:1520 Species:Drosophila melanogaster
Sequence 2:NP_477342.1 Gene:Patj / 44100 FlyBaseID:FBgn0067864 Length:871 Species:Drosophila melanogaster


Alignment Length:989 Identity:208/989 - (21%)
Similarity:328/989 - (33%) Gaps:410/989 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 KVAAKQEGI-----PHGQLHKSYSLTLPKRPPSPSTYSCVKPDS-WVTVTHLQTQSGILD----- 79
            ::.|.::||     |..|:..:.||         ||...:..|. :.|:.|:|.....|:     
  Fly    13 QIEAVKKGIDESDDPKLQMQTAESL---------STILGILQDPVFRTIVHVQDSLSELNAQLAQ 68

  Fly    80 -----PDDCVRDVAD------DREQILAHFDDPGPD------PGVP-QGGGDG----ASGSSSVG 122
                 |:|...|||.      :..:::..||:....      ||.| :.||.|    ....:|.|
  Fly    69 HPSMLPNDFDIDVAGNLVLSLNGGEVMYDFDEQRSSSHSHSAPGSPDKSGGVGEEPRPQSQNSKG 133

  Fly   123 TGSPDIF-RDPTNTEAPTCPRDLSTPHIEVTSTTSGPMAGLGVGLMVRRSS-------------- 172
            .|..|:: .|....:|           ||:.:..:    |||.|::..|:|              
  Fly   134 AGVADLYATDYAQIQA-----------IELVNDGT----GLGFGIIGARNSGVIVKTILPGGVAD 183

  Fly   173 ---------------DPNL--------LASLKAEGSNKR--------WSAAAPHYA--GGDS--P 202
                           |.||        .|.|:..|::.|        .|...|.||  .|.:  |
  Fly   184 KDGRLRSGDHILQIGDVNLHEMVSEQVAAVLRQSGTHVRLVVARPVEQSVPTPQYALEPGTAVVP 248

  Fly   203 ERLFLDKAGGQLSPQWEEDDDPSHQLKEQLLHQQQPHAANGGSSSGNHQP------FARSGRLSM 261
            .|:.:|.|                :|:..|:....|......|::...|.      |...|..||
  Fly   249 TRVLVDPA----------------ELERYLISTGYPEIFGESSTASTPQTTTEDDRFVYRGETSM 297

  Fly   262 QFLGDGNGYKWMEAAEKLQNQPPAQQTYQQGSHHAGHGQNGAYSSKSLPRESKRKEPLGQAYESI 326
              |.|.|    ::..|.|                            :||...|.:..|       
  Fly   298 --LIDPN----IDLEELL----------------------------ALPETEKLQVEL------- 321

  Fly   327 REKDGEMLLIINEYGSPLGLTA---LPDKEHGGGLLVQHVEPGSRAE-RGRLRRDDRILEINGIK 387
             :||          .:.||:|.   :.:||...|:.|:.|.|||.|: .||:|.:|||:|::|..
  Fly   322 -KKD----------ANGLGITIAGYVCEKEELSGIFVKSVSPGSAADLSGRIRVNDRIIEVDGQS 375

  Fly   388 LIGLTESQVQEQLRRALESSELRV-RVLRGDR-NRRQQRDSKVAEMVEVATVSPTRKPHAAPVGT 450
            |.|.:..|..|.|:::.:...||: |.|||.: .:.||..:...::...|..:|:|.|...||.|
  Fly   376 LQGYSNHQAVELLKKSGQVVNLRLERYLRGPKFEQLQQAIAANDKLPSSAPGTPSRAPMPTPVAT 440

  Fly   451 SLQVANT---------------------------------------------------------- 457
            :.....|                                                          
  Fly   441 TSSATTTPSRSITRELEEEALPAPEAFMTTPPSVTTMTTTTLSSFGAGKQLVAVRDSLDGSTKII 505

  Fly   458 ---------------------------------------RK----LGRKIEIML----KKGPNGL 475
                                                   ||    :|..:|:::    |....||
  Fly   506 PTEVVPLADKTEAKNSGVITRHKYYTDPELSDDAETEIIRKWQKIVGSDVEVIVAQIKKFAVGGL 570

  Fly   476 GFSVTTRDNPAGG------HCPIYIKNILPRGAAIEDGRLKPGDRLLEVDGTPMTGKTQTDVVAI 534
            |.|:....:..||      |   ||::|||.|....:|.|:.||.||||:|..:.|....:||||
  Fly   571 GISLEGTVDVEGGREVRPHH---YIRSILPDGPVGVNGVLRSGDELLEVNGERLLGMNHLEVVAI 632

  Fly   535 LRGMPAGATVRIVVSRQ--------------------QELAEQADQ--PAEKSAGVAVAPSVAP- 576
            |:.:|  ..||:|..|.                    :.|....|:  .|:....:|.|.|||. 
  Fly   633 LKELP--LDVRMVCGRNRNSSLLPFSDDTLKKLSNNFENLLPATDRLVKAKSDGSLATAGSVADG 695

  Fly   577 PAVPAAAAPAPPIPVQKSSSARSLFTHQQQSQLNESQHFIDAGSESAASNDSLPPSSN--SWHSR 639
            .:|.||||                                   |.|...:.||.|.:.  .|.|:
  Fly   696 DSVAAAAA-----------------------------------SFSKLKSRSLEPLTGLAMWSSQ 725

  Fly   640 EELTLHIPVHDTEKAGLGVSVKGKTCSNLNASGSSASSGSNGLMKHD----GDLGIFVKNVIHGG 700
            .:: :.:...|   .|||.|:                     |...|    .|..|.:::::.||
  Fly   726 PQI-IELVKGD---RGLGFSI---------------------LDYQDPLDPNDTLIVIRSLVPGG 765

  Fly   701 AASRDGRLRMNDQLLSVNGVSLRGQNNAEAMETLRRAMVNTPGKHPGTITLLVGRKI------LR 759
            .|..||||...|:||.||.::|...:..:|::.|:       |...|.:.:.|.:.:      |:
  Fly   766 VAQLDGRLIPGDRLLFVNSINLENASLDQAVQALK-------GASKGVVRIGVAKPLPMTDNSLK 823

  Fly   760 -----SASSSDILD 768
                 |.:|.:.||
  Fly   824 ACSNASTTSEETLD 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bazNP_001036283.1 DUF3534 <62..174 CDD:288873 32/169 (19%)
PDZ_signaling 341..412 CDD:238492 27/75 (36%)
CRS1_YhbY <390..>436 CDD:294440 12/47 (26%)
PDZ_signaling 462..548 CDD:238492 33/95 (35%)
PDZ_signaling <686..753 CDD:238492 20/70 (29%)
PatjNP_477342.1 L27 12..70 CDD:295425 14/65 (22%)
PDZ_signaling 154..226 CDD:238492 13/75 (17%)
PDZ_signaling 318..400 CDD:238492 30/99 (30%)
PDZ_signaling 557..643 CDD:238492 32/90 (36%)
PDZ_signaling 726..807 CDD:238492 26/112 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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