DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment baz and pard3ab

DIOPT Version :9

Sequence 1:NP_001036283.1 Gene:baz / 32703 FlyBaseID:FBgn0000163 Length:1520 Species:Drosophila melanogaster
Sequence 2:NP_991298.1 Gene:pard3ab / 403050 ZFINID:ZDB-GENE-030925-47 Length:1127 Species:Danio rerio


Alignment Length:1370 Identity:378/1370 - (27%)
Similarity:540/1370 - (39%) Gaps:453/1370 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 WVTVTHLQ-TQSGILDPDDCVRDVADDREQILAHFDDPGPDPGVPQGGGDGASGSSSVGTGSPDI 128
            ||.|..|: ...||||.||.:.|||||:::::|.||:.     .|..||||.| :||.||.||::
Zfish    45 WVQVYRLEHGDGGILDLDDVLCDVADDKDRLVAVFDEQ-----EPHVGGDGTS-ASSTGTQSPEL 103

  Fly   129 FRDPTNTEAPTCPRDLSTPHIEVTSTTSGPMAGLGVGLMVRRSSDPNLL----------ASLKAE 183
            :....:|..|........||.|:..|||  .....:.|.|||||||.||          .|...|
Zfish   104 YCGEPSTSTPLSAFQPYLPHSEIEVTTS--TLRTNMPLHVRRSSDPALLNLTAMSFSEPGSQPEE 166

  Fly   184 GSNK---RWSAAA----PHYA-GGDSPER--------LFLDKAGGQLSPQWEEDDDPSHQLKEQL 232
            .|.|   |||..|    |.:| |.:|.||        ..|.:..||.|.|.|...:.:.      
Zfish   167 PSRKNPTRWSTTAGFLKPRFATGTNSLERKGRGVDTYRSLPRDAGQWSNQKEFQREKAR------ 225

  Fly   233 LHQQQPHAANGGSSSGNHQPFARSGRLSMQFLGDGNGYKWMEAAEKLQNQPPAQQTYQQGSHHAG 297
                       .|.|.||....|                |:|..|:.:.                
Zfish   226 -----------SSLSANHPMVDR----------------WLERQEQDEE---------------- 247

  Fly   298 HGQNGAYSSKSLPRESKRKEPLGQA-----YESIREKDGEMLLI-INEYGSPLGLTALPDKEHGG 356
              :||            |.||:|:|     :..:|..|..:.|: ::..|.|||:..:|   ..|
Zfish   248 --ENG------------RIEPVGRADTCLEHMGVRSLDDIVKLVEVSNDGGPLGIHVVP---FSG 295

  Fly   357 ------GLLVQHVEPGSRAE-RGRLRRDDRILEINGIKLIGLTESQVQEQLRRALESSELRVRVL 414
                  ||||:.:|.|.:|: :|..:.:|.|:.||...|..:...|.|...|:|:.|..:...|:
Zfish   296 RDRRTLGLLVKRLERGGKADVQGLFQENDCIIRINNGDLRNVRFEQAQNMFRQAMRSPVILFHVV 360

  Fly   415 ------------RGDRNRRQQRD------------------------------------SKVAEM 431
                        ..:.|.|...|                                    |.|..:
Zfish   361 PTSMRSQYEQISHNEHNPRANMDLSGRFSPDSLTNDLDSAAHRLAQHRPQPPNNHLDTGSPVHHL 425

  Fly   432 VEVA-------TVSPTRKPHAAPVGTSLQVANTRKLGRKIEIMLKKGPNGLGFSVTTRDNPAGGH 489
            |..:       |.||.|....||.     ...|:|:||::.|.|||||.|||||:|:||.|.||.
Zfish   426 VGSSGKPPTGHTSSPQRGLSPAPT-----TGFTKKVGRRLGIQLKKGPEGLGFSITSRDVPLGGS 485

  Fly   490 CPIYIKNILPRGAAIEDGRLKPGDRLLEVDGTPMTGKTQTDVVAILRGMPAGATVRIVVSRQQEL 554
            .|||:||||||||||:|||||.|||||||:|..:.|:.|.:||::||..|.|.||.:||.||:|.
Zfish   486 APIYVKNILPRGAAIQDGRLKAGDRLLEVNGVDLNGRGQEEVVSLLRATPMGGTVTLVVLRQEET 550

  Fly   555 AEQADQPAEKSAGVAVAPSVAPPAVPAAAAPAPPIPVQKSSSARSLFTHQQQSQLNESQHFIDAG 619
            ....:..||             ||:                      .:.::.::.|.:..    
Zfish   551 FIPREMNAE-------------PAI----------------------QNTREWKVEEEELV---- 576

  Fly   620 SESAASNDSLPPSSNSWHSREELTLHIPVHDTEKAGLGVSVKGKTCSNLNASGSSASSGSNGLMK 684
                     |.|..    :||.|||.:|::|:..|||||||||......:|              
Zfish   577 ---------LTPDG----TREFLTLEVPLNDSGSAGLGVSVKGNRSKESHA-------------- 614

  Fly   685 HDGDLGIFVKNVIHGGAASRDGRLRMNDQLLSVNGVSLRGQNNAEAMETLRRAMVNTPGKHPGTI 749
               |||||||::|:||||.:|||||:||||::|||.||.|:.|.:||||||::| :|.|...|.|
Zfish   615 ---DLGIFVKSIINGGAACKDGRLRVNDQLIAVNGESLLGKTNQDAMETLRKSM-STEGNKRGMI 675

  Fly   750 TLLVGRKILRSASSSDILDHSNSHSHSHSNSSGGSNSNGSGNNNNSSSNASDNSGATVIYLSPEK 814
            .|:|.|:|                   :....|.|.|:..|.....|.             ||:.
Zfish   676 QLIVARRI-------------------NKRLEGESRSSPRGLERTLSP-------------SPDD 708

  Fly   815 REQRCNGGGGGGSAGNEMNRWSNPVLDRLTGGICSSNSAQPSSQQSHQQQPHPSQQQQQQRRLPA 879
            .|:|                    :...|.|.....::.:|.:..::::..|             
Zfish   709 HERR--------------------ISHSLYGIEGLDDNLRPQASTNNRKMNH------------- 740

  Fly   880 APVCSSAALRNESYYMATNDNWSPAQMHLMTAHGNTALLIEDDAEPMSPTLPARPH------DGQ 938
                         |.::...|...          :..::||||          |||      ..|
Zfish   741 -------------YQLSPTVNMPQ----------DDTVIIEDD----------RPHVLPIQLSDQ 772

  Fly   939 HCNTSSANPSQNLAVGNQGPPINTVPGTPSTSSNFDATYSSQLSLETNSGVEHFSRDALGRRSIS 1003
              ::||::.....||....|| ...|..|.:||:.:|.             ..|.|:..||:|:|
Zfish   773 --SSSSSHDDMGFAVETPPPP-PWEPELPDSSSSANAE-------------GQFQREGFGRQSMS 821

  Fly  1004 EKHHAALDARETGTYQRNKKLREERERERRIQLTKSAVYG--GSIESLTARIASANAQFSGYKHA 1066
            ||              |.|:                  ||  |.::.:..|            .:
Zfish   822 EK--------------RTKQ------------------YGDAGQLDIIKTR------------KS 842

  Fly  1067 KTASSIEQRETQQQLAAAEAEARDQLGDLGPSLGMKKSSSLESLQTMVQELQMS-DEPRGHQALR 1130
            |:...:.......|  ..|........|:|||||:|||||||||||.|.|:.:: |.|......|
Zfish   843 KSMDLVADEINLTQ--CTENHTGSSTRDVGPSLGLKKSSSLESLQTAVAEVTLNGDMPFHRPRPR 905

  Fly  1131 APRGRGREDSLRAAV---VSEPDASKPRKTWL--LEDGDHEGGFASQRNG--------PF----Q 1178
            ..||||..:|.|||:   ...|.|::..:..:  ||: |.||...|.|:.        |.    |
Zfish   906 IIRGRGCNESFRAAIDKSYDRPAANEDEEECMDTLEE-DTEGSSRSGRDSVSTVADLTPLPVTEQ 969

  Fly  1179 SSLN------------DGKHGCKSSRAK---KPSILRGIGHMFRFGKNRKDGVVPVDNYAVNISP 1228
            ..:|            .||...|..:.|   |..:|:|:|.||||||.|||..:....:.   :.
Zfish   970 QLINGNQPENDKKKEKGGKDKKKPEKEKGKTKKGMLKGLGEMFRFGKYRKDERLDGAKWK---AE 1031

  Fly  1229 PTSVVSTATSPQLQQQQQQQLQQHQ-QQQQIPTAALAALERNGKPPAYQPPPPLPAPNGVGS--- 1289
            .|......|....|:|::.|.:..: :|:|......|.::...:......||..|...|:||   
Zfish  1032 ETHASEEETRRMKQEQERIQAKTREIRQRQARERDYAEIQDFSRSTLTSLPPEEPPYAGIGSLEH 1096

  Fly  1290 NGIHQ 1294
            .|.|:
Zfish  1097 GGYHR 1101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bazNP_001036283.1 DUF3534 <62..174 CDD:288873 44/109 (40%)
PDZ_signaling 341..412 CDD:238492 24/77 (31%)
CRS1_YhbY <390..>436 CDD:294440 12/100 (12%)
PDZ_signaling 462..548 CDD:238492 54/85 (64%)
PDZ_signaling <686..753 CDD:238492 40/66 (61%)
pard3abNP_991298.1 DUF3534 1..147 CDD:288873 44/109 (40%)
PDZ_signaling 274..356 CDD:238492 25/84 (30%)
PDZ 462..547 CDD:214570 55/84 (65%)
PDZ_signaling 589..680 CDD:238492 52/108 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595878
Domainoid 1 1.000 114 1.000 Domainoid score I6031
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 354 1.000 Inparanoid score I2213
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D387987at33208
OrthoFinder 1 1.000 - - FOG0002688
OrthoInspector 1 1.000 - - otm26103
orthoMCL 1 0.900 - - OOG6_107739
Panther 1 1.100 - - O PTHR16484
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2449
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.990

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