DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment baz and gopc

DIOPT Version :9

Sequence 1:NP_001036283.1 Gene:baz / 32703 FlyBaseID:FBgn0000163 Length:1520 Species:Drosophila melanogaster
Sequence 2:NP_956851.1 Gene:gopc / 326887 ZFINID:ZDB-GENE-030131-5086 Length:455 Species:Danio rerio


Alignment Length:620 Identity:124/620 - (20%)
Similarity:205/620 - (33%) Gaps:225/620 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 SSSVGTGSPDIFRDPTNTEAPTCPRDLSTPHIEVTSTTSGPMAGLGVGLMVRR------------ 170
            :|:.|.|||.                        :..::||.|..|.|:.:.|            
Zfish     3 ASAGGAGSPG------------------------SGLSAGPAAATGSGMSMFRWLEVLEKEFDKA 43

  Fly   171 ---------SSDPNLLASLKAEGSNKRWSAAAPHYAGGDSPERLFLDKAGGQLSPQWEEDDDPSH 226
                     ..||: .|.:..||..|..|                |.....||..:.:.....:|
Zfish    44 FVDVDLLLGEIDPD-QADITYEGRQKMTS----------------LSSCFAQLCHKAQTIFQLNH 91

  Fly   227 QLKEQL--------------------LHQQ--QPHAANGGSSSGNHQPFARSGRLSMQFLGDGNG 269
            :|:.||                    :|:|  |.||                    ||......|
Zfish    92 KLEAQLVDLRSELTDVQAEKVVVEKEVHEQLLQLHA--------------------MQLKLQAKG 136

  Fly   270 YKWMEAAEKLQNQPPAQQTYQQGSHHAGHGQNGAYSSKSL--PRESKRKEPLGQAYESIREKDGE 332
            .:.:: ::.::::.|.....::              .|.|  .::.|.||...:|...:.:|:.|
Zfish   137 GQAVD-SDSIKDRMPVPSVEEK--------------EKELEASKKEKVKEVKLEAEVKMLKKENE 186

  Fly   333 ML------LIINEYGSPLGLTALPDKEHGGGLLVQHVEPGSRAERGRLRRDDRILEINGIKLIGL 391
            .|      |....||:.|....| |||..|  .||.::...|..:|....          ||...
Zfish   187 ALRRHIAVLQAEVYGARLAAKYL-DKELAG--RVQQIQLLGRDMKGPAHD----------KLWNQ 238

  Fly   392 TESQVQEQLRRALESSELRVRVLRGDRNRRQQRDSKVAEMVEVATVSPTRKPHAAPVGTSL-QVA 455
            .|:::.      |...:..:|..|| ||     |.|              ||..:|||... .:.
Zfish   239 LEAEIH------LHRHKTVIRACRG-RN-----DPK--------------KPLPSPVGHDTDSLK 277

  Fly   456 NTRKLG--RKIEIMLKKGPNGLGFSVTTRDNPAGGH---CPIYIKNILPRGAAIEDGRLKPGDRL 515
            .|:.:|  ||: ::.|:...|||.|:|      ||.   .||.|..|.|...|...|.|..||.:
Zfish   278 KTQGVGPIRKV-VLTKEDHEGLGISIT------GGKEHGVPILISEIHPTQPAERCGGLHVGDAI 335

  Fly   516 LEVDGTPMTGKTQTDVVAILRGMPAGATVRIVVSRQQ-ELAEQADQPAEKSAGVAVAPSVAPPAV 579
            |.|:...:......:.|.||             |:|: |:..:.         |.|||.|     
Zfish   336 LAVNNINLRDAKHKEAVTIL-------------SQQRGEIEFEV---------VYVAPEV----- 373

  Fly   580 PAAAAPAPPIPVQKSSSARSLFTHQQQSQLNESQHFIDAGSESAASNDSLPPSSNSWHSREELTL 644
               .:....:..:..|.      |:.:..|:|    ::..|.:..:|.:..|:     |.:.:..
Zfish   374 ---DSDDENVEYEDDSG------HRYRLYLDE----LEEASAANHNNGTADPA-----SLQAVGK 420

  Fly   645 HIPVHDTEKAGLGVSVKGKTCSNLNASGSSASSGS 679
            |:..:.||...:|:|.:..:....:.:..||.|.|
Zfish   421 HLVNNRTENGDVGLSSECPSDDKTSKTAESAESSS 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bazNP_001036283.1 DUF3534 <62..174 CDD:288873 11/76 (14%)
PDZ_signaling 341..412 CDD:238492 15/70 (21%)
CRS1_YhbY <390..>436 CDD:294440 9/45 (20%)
PDZ_signaling 462..548 CDD:238492 25/88 (28%)
PDZ_signaling <686..753 CDD:238492
gopcNP_956851.1 PDZ_signaling 285..367 CDD:238492 28/110 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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