DRSC/TRiP Functional Genomics Resources

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Protein Alignment baz and Cytip

DIOPT Version :9

Sequence 1:NP_001036283.1 Gene:baz / 32703 FlyBaseID:FBgn0000163 Length:1520 Species:Drosophila melanogaster
Sequence 2:NP_001012086.1 Gene:Cytip / 311047 RGDID:1307990 Length:359 Species:Rattus norvegicus


Alignment Length:394 Identity:87/394 - (22%)
Similarity:121/394 - (30%) Gaps:150/394 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   419 NRRQQRDSKVAEMVEVATVSPTRKPHAAPVGTSLQVANTRKLG------RKIEIMLKKGPNG-LG 476
            |||.|   .:|:  .|||:...||        .|.:|.:..||      ||: :.::|..|| .|
  Rat    39 NRRIQ---MLAD--TVATLPRGRK--------QLALARSSSLGDFSCSQRKV-VTVEKQDNGTFG 89

  Fly   477 FSVTT---------------------RDNPAGGHCPIYIKNILPRGAAIEDGRLKPGDRLLEVDG 520
            |.:.|                     .|:||  ||                ..|:.||....|:|
  Rat    90 FEIQTYRLQNQNICSSEVCTMICKVQEDSPA--HC----------------AGLQVGDIFANVNG 136

  Fly   521 TPMTGKTQTDVVAILRGMPAGATVR----IVVSRQQEL---AEQADQPAEKSAGVAVAPSVAPPA 578
            ....|.|...||.::|......|:.    .::.|:.||   .:...|..:|              
  Rat   137 VSTEGFTHKQVVDLIRSSGNLLTIETLNGTMIHRRAELEAKLQTLKQTLKK-------------- 187

  Fly   579 VPAAAAPAPPIPVQKSSSARSLFTHQQQ--------------SQLNESQHFIDAGSESAASND-- 627
                          |....|||...:|:              ..|:||..|.:....|.|..|  
  Rat   188 --------------KWVELRSLHLQEQRLLHGDAANSPNLENMNLDESSLFGNLLGPSPAFLDRP 238

  Fly   628 --SLPPSSNSWHSREELTLHIPVHDTEKAGLGV---SVKGKTCSNLNASGSSASSGSNGLMKHDG 687
              |...|..||.|      .:.|...:..|..|   |::|       |.....|:........||
  Rat   239 RLSSESSCKSWLS------SLTVDSEDDYGTSVSEDSIRG-------AFSRQTSTDDECFHSKDG 290

  Fly   688 DLGIFVKNVIHGGAASRDGRLRMNDQLLSVNGVS-LRGQNNAEAMETL----RRAMVN------T 741
            |       .|...|:||..|   :..:.|....| |...|.:....||    ||..|.      .
  Rat   291 D-------EILRNASSRRNR---SISITSSGSFSPLWESNYSSVFGTLPRKSRRGSVRKQILKFI 345

  Fly   742 PGKH 745
            ||.|
  Rat   346 PGLH 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bazNP_001036283.1 DUF3534 <62..174 CDD:288873
PDZ_signaling 341..412 CDD:238492
CRS1_YhbY <390..>436 CDD:294440 6/16 (38%)
PDZ_signaling 462..548 CDD:238492 24/111 (22%)
PDZ_signaling <686..753 CDD:238492 20/71 (28%)
CytipNP_001012086.1 PDZ_signaling 76..161 CDD:238492 23/103 (22%)
Interaction with CYTH1. /evidence=ECO:0000250 166..188 5/49 (10%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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