DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment baz and Grip2

DIOPT Version :9

Sequence 1:NP_001036283.1 Gene:baz / 32703 FlyBaseID:FBgn0000163 Length:1520 Species:Drosophila melanogaster
Sequence 2:XP_006506166.1 Gene:Grip2 / 243547 MGIID:2681173 Length:1049 Species:Mus musculus


Alignment Length:1265 Identity:238/1265 - (18%)
Similarity:377/1265 - (29%) Gaps:493/1265 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FDVPPKCPALAN--------------KLGGLFGWRHTYKVAAKQEGIPHGQLHKSYSLTLP-KRP 51
            :::||  ||..|              |.|..||:        ...|..|..||||..|.|. .||
Mouse   141 YELPP--PAPENNPRIISKTVDVSLYKEGNSFGF--------VLRGGAHEDLHKSRPLVLTYVRP 195

  Fly    52 PSPSTYSCVKPDSWVTVTHLQTQSGILDPDDCVRDVADDREQILAHFDDPGPDPGVPQGGGDGAS 116
            ..|:                                  |||..|...|......|:|..|...|:
Mouse   196 GGPA----------------------------------DREGSLKVGDRLLSIDGIPLHGASHAT 226

  Fly   117 GSSSVGTGSPD-IFRDPTNTEAPTCPRDLSTPHIEVTSTTSGPMAGLGVGLMVRRSSDPNLLASL 180
            ..:::...|.: :|:...:...|....:.|.|.:...:.|.|...|:.:.....|:.....:..:
Mouse   227 AIATLQQCSHEALFQVEYDVATPDTVANASGPLVVEIAKTPGSALGISLTTGSHRNKPAITIDRI 291

  Fly   181 KAEGSNKRWSA--AAPHYAG--GDSPERLFLDKAGGQL-------------SPQWEEDDDPSH-- 226
            |......|..|  |..|...  |.|.|...|.:|...|             |||......|..  
Mouse   292 KPASVVDRSGALHAGDHILAIDGTSTEHCSLVEATKLLASVTEKVRLEILPSPQSRRPLKPPEAV 356

  Fly   227 --QLKEQLLHQQQPHAANGGSSSGNH---QPFARSGRLSMQFLGDGNGYKWMEAAEKLQNQPPAQ 286
              |..|| ||:..|.|.:..|...:|   ..:|..|                          |.|
Mouse   357 RIQRSEQ-LHRWDPSAPSCHSPRPSHCRAPTWAAGG--------------------------PDQ 394

  Fly   287 QTYQQGSHHAGHGQNGAY---SSKSLP------------RESKRKE----------PLGQAYESI 326
            ......:..:....|.|:   ::.:||            |..:|||          .:|...:.:
Mouse   395 SRSVSSTPFSSPTMNPAFPCANASTLPRGPMSPRTTAGRRRQRRKEHRSSLSLASSTVGPGGQIV 459

  Fly   327 REKDGEMLLIINEYGSPLGLTALPDKEHGGGL----------LVQHVEPGSRAER-GRLRRDDRI 380
            ..:..|::|.    |.||....|   :..||:          ||:.:||.|.||| |.|:..||:
Mouse   460 HTETTEVVLC----GDPLSGFGL---QLQGGIFATETLSSPPLVRFIEPDSPAERCGLLQVGDRV 517

  Fly   381 LEINGIKLIGLTESQVQEQLRRALESSELRVRVLRGDRNRRQQRDSKVAEMVEVATVSPTRKPHA 445
            |.||||    .||....|:..:.|..:.|..:|:       .:.:..|||.|             
Mouse   518 LAINGI----ATEDGTMEEANQLLRDAALARKVV-------LEIEFDVAESV------------- 558

  Fly   446 APVGTSLQVANTRKLGRKIEIMLKKGPNGLGFSVTTRDNPAGGHCPIYIKNILPRGAAIEDGRLK 510
            .|...:..|...::.|  :|         ||.::::.....|.  |:.|.:|.....|...|.|:
Mouse   559 IPSSGTFHVKLPKRRG--VE---------LGITISSASRKRGE--PLIISDIKKGSVAHRTGTLE 610

  Fly   511 PGDRLLEVDGTPMTGKTQTDVVAILRGMPAGATVRIVVSRQQELAEQADQPAEKSAGVAVAPSVA 575
            |||:||.:|...:......|.|.|||  .....|::.:.:.::.:::                  
Mouse   611 PGDKLLAIDNIRLDHCPMEDAVQILR--QCEDLVKLKIRKDEDNSDE------------------ 655

  Fly   576 PPAVPAAAAPAPPIPVQKSSSARSLFTHQQQSQLNESQHFIDAGSESAASNDSLPPSSNSWHSRE 640
                            |:||.|.| :|.:                                    
Mouse   656 ----------------QESSGAVS-YTVE------------------------------------ 667

  Fly   641 ELTLHIPVHDTEKAGLGVSVKGKTCSNLNASGSSASSGSNGLMKHDGDLGIFVKN--------VI 697
                                                     |.::.|.|||.:..        :|
Mouse   668 -----------------------------------------LKRYGGPLGITISGTEEPFDPIII 691

  Fly   698 HG----GAASRDGRLRMNDQLLSVNGVSLRGQNNAEAMETLRRAMVNTPGKHPGTITLLVGRKIL 758
            .|    |.|.|.|.:.:.|::|::|.|||:|:..:||:..|:.|     |:   |:||.:.:::.
Mouse   692 SGLTKRGLAERTGAIHVGDRILAINSVSLKGRPLSEAIHLLQVA-----GE---TVTLKIKKQLD 748

  Fly   759 RSASSSDILDHSNSHSHSHSNSSGGSNSNGSGNNNNSSSNASD---------NSGATVIYLSPEK 814
            |....                           ..:.|.|.|||         ..|......||  
Mouse   749 RPLLP---------------------------RQSGSLSEASDVDEDPPEALKGGLLATRFSP-- 784

  Fly   815 REQRCNGGGGGGSAGNEMNRWSNPVLDRLTGGICSSNSAQPSSQQSHQQQPHPSQQQQQQRRLPA 879
                     ...|..:.:..|.:...|   ||...:.|..|                        
Mouse   785 ---------AVPSVDSAVESWGSSATD---GGFGGTGSYTP------------------------ 813

  Fly   880 APVCSSAALRNESYYMATNDNWSPAQMHLMTAHGNTALLIEDDAEPMSP---TLPARPHDGQHCN 941
                 ..|:|:     .|...|.|::             ::....|:.|   :....|.|     
Mouse   814 -----QVAVRS-----VTPQEWRPSR-------------LKSSPPPLEPRRTSYTPGPSD----- 850

  Fly   942 TSSANPSQNLAVGNQGPPINTVPGTPSTSSNFDATYSSQLSLETNSGVEHFSRDALGRRSISEKH 1006
              .:.|.:.   |:..||::..|| |:....|.......|....:.|.....|:..........|
Mouse   851 --ESFPEEE---GDWEPPMSPAPG-PAREEGFWRVLGEALEDLESCGQSELLRELEASIMTGTVH 909

  Fly  1007 HAALDARE-TGTYQRNKKLREERE-----------RERRIQLTKSAV---YGGSIES-------- 1048
            ..|:|.|. :..::|::::|...|           ...|:.|.|..|   :|.|:..        
Mouse   910 SVAVDGRPGSRPWRRSREVRTSPEDLQELLLPTPLEMHRVTLHKDPVRNDFGFSVSDGLLEKGVY 974

  Fly  1049 -LTARIASANAQFSG---YKHAKTASSIEQRETQQQLAA---AEAEARDQLGDLGPSLGMKKSSS 1106
             .|.|| ...||..|   :......:.:..|:....||.   |||      ||            
Mouse   975 VHTVRI-DGPAQLGGLQPFDRLLQVNHVRTRDFDCCLAVPLLAEA------GD------------ 1020

  Fly  1107 LESLQTMVQELQMSDEPRGHQALRAPRGRG 1136
                   :.||.:|..|.. |:.|.|...|
Mouse  1021 -------ILELVVSRNPLA-QSRRTPGAPG 1042

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bazNP_001036283.1 DUF3534 <62..174 CDD:288873 18/112 (16%)
PDZ_signaling 341..412 CDD:238492 28/81 (35%)
CRS1_YhbY <390..>436 CDD:294440 10/45 (22%)
PDZ_signaling 462..548 CDD:238492 22/85 (26%)
PDZ_signaling <686..753 CDD:238492 25/78 (32%)
Grip2XP_006506166.1 PDZ_signaling 58..140 CDD:238492
PDZ_signaling 160..243 CDD:238492 26/124 (21%)
PDZ_signaling 258..341 CDD:238492 16/82 (20%)
PDZ_signaling 463..551 CDD:238492 31/105 (30%)
PDZ_signaling 564..647 CDD:238492 24/97 (25%)
PDZ_signaling 664..744 CDD:238492 27/164 (16%)
PDZ_signaling 947..1026 CDD:238492 22/104 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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