DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment baz and F20D6.1

DIOPT Version :9

Sequence 1:NP_001036283.1 Gene:baz / 32703 FlyBaseID:FBgn0000163 Length:1520 Species:Drosophila melanogaster
Sequence 2:NP_505110.2 Gene:F20D6.1 / 184722 WormBaseID:WBGene00017633 Length:180 Species:Caenorhabditis elegans


Alignment Length:157 Identity:32/157 - (20%)
Similarity:52/157 - (33%) Gaps:28/157 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   475 LGFSVTTRDNPAGGHCPIYIKNILPRGAAIEDGRLKPGDRLLEVDGTPMTGKTQTDVVAILRGMP 539
            ||.:|.:..|      .:|:::......:.....|..||.:|.:|.|.:.....|. .|:..|..
 Worm    15 LGINVKSYQN------VVYVESTDNTWGSTTRRFLYLGDAILRIDDTEILDLPTTQ-NALRTGFS 72

  Fly   540 AGATVRIVVSRQQELAEQADQPAEKSAGVAVAPSVAPPAVPAAAAP---------APPIPVQK-- 593
            ....|.|:|.|.......|...:.......:.|.:....:....|.         |.|.|:.|  
 Worm    73 KNGVVTIIVERAVHQESYAFVRSVMGFSKVLDPMLPQDVIQTCTARLAYHNKHGFAEPTPIFKGY 137

  Fly   594 ----SSSARSLFTHQ------QQSQLN 610
                ||:.|...|:.      :..|||
 Worm   138 TKDYSSAGRVSVTNTVEIKSIRTEQLN 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bazNP_001036283.1 DUF3534 <62..174 CDD:288873
PDZ_signaling 341..412 CDD:238492
CRS1_YhbY <390..>436 CDD:294440
PDZ_signaling 462..548 CDD:238492 16/72 (22%)
PDZ_signaling <686..753 CDD:238492
F20D6.1NP_505110.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.