DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment baz and par-3

DIOPT Version :9

Sequence 1:NP_001036283.1 Gene:baz / 32703 FlyBaseID:FBgn0000163 Length:1520 Species:Drosophila melanogaster
Sequence 2:NP_001293669.1 Gene:par-3 / 175783 WormBaseID:WBGene00003918 Length:1533 Species:Caenorhabditis elegans


Alignment Length:1580 Identity:332/1580 - (21%)
Similarity:552/1580 - (34%) Gaps:514/1580 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 TQSGILDPDDCVRDVAD-DREQILA----------------------HFDDPGP-------DPGV 107
            :..||||.||.:.:|.| :.:||||                      |:..|.|       .|..
 Worm   122 SDGGILDMDDVLEEVFDLNYDQILAITDEANGGSTTPTYSQIQKQQHHYAQPLPYARKFDGGPST 186

  Fly   108 PQGGGDG----------ASGSSSVG---TGSPDIFRDPTNTEAPTCPRDLSTPHIEVTSTTSGPM 159
            |.....|          |:...:||   :.|.|....||::      ::.....:||:|....|.
 Worm   187 PIASAFGSVTVNHQAHRAASPYNVGFARSNSRDFAPQPTHS------KERRDSVVEVSSFDQIPQ 245

  Fly   160 AGLGVGL--MVRRSSD---------PNLLASLKAEGSNKRWSAAAPHYAGGDSPERLFLDKAGGQ 213
            :||.|..  ..|:|.|         |.|.:||:.|.|..|...|.|            :.::...
 Worm   246 SGLRVSTPKPSRQSEDVIDGKPMNQPILRSSLRTEASGSRTEEATP------------VKQSRVT 298

  Fly   214 LSPQ-----WEEDDDPSHQLKEQLLHQQQPHAANGGSSSGNHQPFARSGRLSMQFLGDGNGYKWM 273
            |||:     .|:|:..|.:.|.   :.:.|.....||.        |..|::...|...:     
 Worm   299 LSPEVEKKLAEQDERKSERRKH---YDKNPGRFARGSD--------RKSRITDALLDARD----- 347

  Fly   274 EAAEKLQNQPPAQQTYQQ------------GSHHAGHGQNGAYSSKSLPRESKRKEPLGQAYESI 326
            ..|::|::|.||::|..|            |:        ...:...:|.:|:.::.||....::
 Worm   348 RIADQLESQNPAEETKSQMIRVKIDQGPMPGT--------SLVTFPPIPEKSENEKQLGIEVNAV 404

  Fly   327 REKDGEMLLIINEYGSPLGLTALPDKEHGGGLLVQHVEPGSR-AERGRLRRDDRILEINGIKLIG 390
            .::..|           |..|:.|.|.  ..:.:..:|.|.| |:.||:|..|.|:.|:|..:..
 Worm   405 FDESSE-----------LPGTSEPTKL--SSVQIMKIEDGGRIAKDGRIRVGDCIVAIDGKPVDQ 456

  Fly   391 LTESQVQEQLR--RALESSELRVRVLRGDRNRRQQRDSKVAEMVEVATVSPTRKPHAAPVGTSLQ 453
            ::..:|:..:.  .|:.|..:.:.:.|...:..:|..|                  |.|:.::||
 Worm   457 MSIIRVRASISDLAAVTSRPVTLIINRSLESFLEQESS------------------AKPIQSALQ 503

  Fly   454 VANTRKLGRKIEIMLKKGPNGLGFSVTTRDNPAGGHCPIYIKNILPRGAAIEDGRLKPGDRLLEV 518
            .|||:.:|....:.|.|..||.||:||.|:. |.|....||..:.|.|.|:  |.||.||||||:
 Worm   504 QANTQYIGHTTVVELIKSSNGFGFTVTGRET-AKGERLFYIGTVKPYGVAL--GHLKSGDRLLEI 565

  Fly   519 DGTPMTGKTQTDVVAILRGMPAGATVRIVVSRQQE------LAEQADQPAEKSAGVAVAPSVAPP 577
            :|||....||:::|..|:....|..::.:|||..:      .|...::..|::..| |.....|.
 Worm   566 NGTPTGQWTQSEIVEKLKETMVGEKIKFLVSRVSQSAIMSTSASSENKENEETLKV-VEEEKIPQ 629

  Fly   578 AVPAAAAPAPPIPVQKSSSARSLFTHQQQSQLNESQHFIDAGSESAASNDSLPPSSNSWHSREEL 642
            .:|..|...||:|                                    ...|..|.|..||.|:
 Worm   630 KLPLPALMTPPVP------------------------------------KDTPALSPSGASRFEI 658

  Fly   643 TLHIP-VHDTEKAGLGVSVKGKTCSNLNASGSSASSGSNGLMKHDGDLGIFVKNVIHGGAASRDG 706
            .  || ::.:..||||||:|.:.        |..|:||.      .|.|||:|||:|||||.::|
 Worm   659 V--IPFINGSSSAGLGVSLKARV--------SKKSNGSK------VDCGIFIKNVMHGGAAFKEG 707

  Fly   707 RLRMNDQLLSVNGVSLRGQNNAEAMETLRRAMVNTPGKHPGTITLLVGRKILRSASSSDILDHSN 771
            .||::|:::.|..:.|...:|.||...|.:.:     |..|.|                      
 Worm   708 GLRVDDRIVGVEDIDLEPLDNREAQAALAKKL-----KEVGMI---------------------- 745

  Fly   772 SHSHSHSNSSGGSNSNGSGNNNNSSSNASDNSGATVIYLSPEKREQRCNGGGGGGSAGNEMNRWS 836
                                        |.|...|:      .|...||.|        :::|  
 Worm   746 ----------------------------SSNVRLTI------SRYNECNPG--------QISR-- 766

  Fly   837 NPVLDRLTGGICSSNSAQPSSQQSHQQQPH---PSQQQQQQRRLPAAPVCSSAALRNESYYMATN 898
              .|.|:|   ..::|..|||:.|....|.   ||         ||....||:..          
 Worm   767 --DLSRIT---VDASSPSPSSRMSSHTAPDSLLPS---------PATRGTSSSGA---------- 807

  Fly   899 DNWSPAQMHLMTAHGNTALLIEDDAEPMSPTLPARPHDGQHCNTSSANPSQNLAVGNQGPPINTV 963
                                                 |..|...|||:              :.|
 Worm   808 -------------------------------------DSSHSRQSSAS--------------SAV 821

  Fly   964 PGTPSTSSNFDATYSSQLSLETNS----GVEHFSRDALGRRSISEKH--HAALDARETGTYQRNK 1022
            |..|:..:..|:..|...|....|    ..:.|:|:.|||:|:|||.  .||.|.:....:|..|
 Worm   822 PAVPARLTERDSIVSDGTSRNDESELPDSADPFNREGLGRKSLSEKRGMGAAADPQHIKLFQDIK 886

  Fly  1023 KLREERERERRIQLTKSAVYGGSIESLTARIASANAQFSGYKHAKTASSIEQRETQQQLAAAEAE 1087
            ..|:                ..:..|.|.:.:.:..:.|..::.::...:....|   .|||.|.
 Worm   887 HQRQ----------------NSAPTSSTQKRSKSQPRSSSQRNYRSPMKLVDLPT---TAAASAS 932

  Fly  1088 ARDQLGDLGPSLGMKKSSSLESLQTMVQELQMSDEPRGHQALRAPRGRGREDSLRAAVVSEPDAS 1152
            ...|..|....|. ::|.|:||:...|:.:.              ||.|:..:..::.|....|:
 Worm   933 TNSQNLDDSDMLN-RRSQSMESINRPVESIL--------------RGTGQIPTGSSSKVQFMQAA 982

  Fly  1153 KPRKTWLLEDGDHEGGFASQRNGPFQSSLNDGKHGCKSSRAKKPSILRGIGHMFRFGKNRKDG-- 1215
            .|      :......|.|..|....:|...|     ||.|....:....:.:.|.||...:|.  
 Worm   983 SP------DQHPFPPGAALLRLKNEESRSRD-----KSRRKSMGNPFSAMRNFFGFGSKSRDASP 1036

  Fly  1216 -VVPVDNYAV-NISPPTSVVSTATSPQLQQQQQQQLQQHQQQQQ----------------IP--- 1259
             ..|.::..: ::..|.|::....:.. .::....|..||.|::                ||   
 Worm  1037 EKTPTESVQLRSVERPKSIIDERNNGS-SERAPPPLPPHQSQRRGSGGNVFVDYGEPYGLIPQYP 1100

  Fly  1260 ---TAALAALERNG-------KPPAYQPPPPLPAPNGVGSNGIHQNDIFNHRYQHYANYEDLHQQ 1314
               :..:|...:||       |..:..||||.||      .|:....:.|.::  |::|.: ...
 Worm  1101 HNTSKIMATSAQNGIRLISYTKNQSSSPPPPPPA------GGLSPLQLGNSKF--YSSYRE-PSI 1156

  Fly  1315 HQQHQISGGDSTTSISETLSESTLECMRQQVIRQRIKVEAESRRHQHYHSQRSARSQDVSMHSTS 1379
            .|:.::.....|.::|.|:....:...|         |.|:|....:..:..  |...|...||.
 Worm  1157 TQRPRLPDMSRTPTLSSTIDTRPIAITR---------VGAQSSMKTNTFTDN--RVPAVIHRSTR 1210

  Fly  1380 SGSQPGSLAQPQAQSNGVRPMSSYYEYETVQQQRVGSIKHSHSSSATSSSSSP-----INVPH-- 1437
                              ||||: .:|:.:  .|..|:...|.......|..|     :::|.  
 Worm  1211 ------------------RPMST-MDYQHL--MRTMSVPEYHHKPPVEVSRKPVERCVVSIPPNT 1254

  Fly  1438 -----------------WKAAAMNGYSPASLNSSARSRGPFVTQVTIREQSSGGIPAHLLQQHQQ 1485
                             .:.|.::..:|.::..|.|.     ::....|||:....:.....|::
 Worm  1255 MKTSPTINKFPNNQRDINRVAVVDVVTPTTITCSTRG-----SRTLAVEQSAPLRSSSPRTDHRR 1314

  Fly  1486 QQLQQQQPTYQTVQKMSGPS 1505
            ...|..:|:.:..:..|.||
 Worm  1315 YGSQPLRPSNEANRSSSSPS 1334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bazNP_001036283.1 DUF3534 <62..174 CDD:288873 35/154 (23%)
PDZ_signaling 341..412 CDD:238492 18/73 (25%)
CRS1_YhbY <390..>436 CDD:294440 6/47 (13%)
PDZ_signaling 462..548 CDD:238492 33/85 (39%)
PDZ_signaling <686..753 CDD:238492 25/66 (38%)
par-3NP_001293669.1 DUF3534 68..216 CDD:288873 21/93 (23%)
PDZ_signaling <423..481 CDD:238492 14/57 (25%)
PDZ_signaling 513..595 CDD:238492 33/84 (39%)
PDZ_signaling 663..753 CDD:238492 38/158 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167209
Domainoid 1 1.000 55 1.000 Domainoid score I7488
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.946395 Normalized mean entropy S7653
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D387987at33208
OrthoFinder 1 1.000 - - FOG0002688
OrthoInspector 1 1.000 - - oto20437
orthoMCL 1 0.900 - - OOG6_107739
Panther 1 1.100 - - LDO PTHR16484
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2708
SonicParanoid 1 1.000 - - X2449
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.830

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