DRSC/TRiP Functional Genomics Resources

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Protein Alignment baz and gras-1

DIOPT Version :9

Sequence 1:NP_001036283.1 Gene:baz / 32703 FlyBaseID:FBgn0000163 Length:1520 Species:Drosophila melanogaster
Sequence 2:NP_492164.1 Gene:gras-1 / 172549 WormBaseID:WBGene00009272 Length:245 Species:Caenorhabditis elegans


Alignment Length:151 Identity:28/151 - (18%)
Similarity:62/151 - (41%) Gaps:30/151 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   305 SSKSLPRESKRKEPLGQ-AYESIREKDGEMLLII------NEYGSPLGLTALPDKEHGGG----- 357
            |.:.|..::|.:.||.. .::.|.::..:..|::      ..:|  ..|.:...|.....     
 Worm    27 SEQRLLCDAKEEYPLNDYLFDGINQESAQRSLLLCRQTFETSFG--FALQSYVFKRTSSNSYERI 89

  Fly   358 LLVQHVEPGSRAERGRLRRDDRILEINGIKLIGLTESQVQEQLRRALESS------------ELR 410
            ..|.:|...|.|:|..:.|.|.::.:|...::..:.:::.|.:.:.|:.|            ||.
 Worm    90 TYVDYVSADSPADRCGITRGDMVIAVNEKSVVTASHAEIVESIAQCLQVSLVLVFKDVARIVELS 154

  Fly   411 VRVLRGDRNRRQQRDSKVAEM 431
            :|.::    .|...|:|:.|:
 Worm   155 MRSIQ----LRFMLDAKIREL 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bazNP_001036283.1 DUF3534 <62..174 CDD:288873
PDZ_signaling 341..412 CDD:238492 16/87 (18%)
CRS1_YhbY <390..>436 CDD:294440 10/54 (19%)
PDZ_signaling 462..548 CDD:238492
PDZ_signaling <686..753 CDD:238492
gras-1NP_492164.1 PDZ 67..145 CDD:238080 14/79 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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