DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment baz and smz-2

DIOPT Version :9

Sequence 1:NP_001036283.1 Gene:baz / 32703 FlyBaseID:FBgn0000163 Length:1520 Species:Drosophila melanogaster
Sequence 2:NP_491965.1 Gene:smz-2 / 172415 WormBaseID:WBGene00020661 Length:274 Species:Caenorhabditis elegans


Alignment Length:306 Identity:71/306 - (23%)
Similarity:120/306 - (39%) Gaps:86/306 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   339 EYGSPLGLTALPDKEHGGGLLVQHVEPGSRAERGRLRRDDRILEINGIKLIGLTESQVQEQLRRA 403
            |.|.|||.|  |:.:    |::..::.|:.:| |:||..|::.::||.......:  ....||.|
 Worm    14 EEGEPLGAT--PNDK----LVITKIQAGTISE-GKLRIGDQVKKVNGQNCKDCND--FFRALRFA 69

  Fly   404 LESSELRVRVLRGDRNRRQQRDSKVAEMVEV--------ATVSPTRKPHAAPVGTSLQVANTRKL 460
            ...:::.|           .||.|.||.:|.        |.:...|:.:...:.|.:.|.|..||
 Worm    70 APCAKITV-----------NRDEKKAEELEARVHIPEDRAKIIQRREGYVYELATLVWVQNGPKL 123

  Fly   461 GRKIEIMLKKGPNGLGFSVTTRDNPAGGHCPIYIKNILPRGAAIEDGRLKPGDRLLEVDGTPMTG 525
            |..|:....:                     :.:..:.|  .::.:..|..||.|.:|||.|::.
 Worm   124 GLGIKHFQNR---------------------VLVSRVDP--GSLAEKCLVLGDHLCDVDGIPVSD 165

  Fly   526 KTQTDVV--AILRGMPAGATVRIVVSR----------QQELAEQADQPA-----EKSAGVA---- 569
            |   ||.  .:::.:.....|..||.|          :|.||....||.     |...|:|    
 Worm   166 K---DVARDLLVKNIQEKGKVTFVVERPDSIDAKQWAKQALATNLMQPPSVQMNEDVKGIASQYR 227

  Fly   570 -VAPSVAPPAVPAAAAPAPPIPVQKSSSARSLFTHQQQSQLNESQH 614
             ..|.:.||| .:|.:..|        :||.: :..:|:|.:|..|
 Worm   228 QALPGLKPPA-KSAMSTGP--------NARRV-SIIEQTQTHEIGH 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bazNP_001036283.1 DUF3534 <62..174 CDD:288873
PDZ_signaling 341..412 CDD:238492 18/70 (26%)
CRS1_YhbY <390..>436 CDD:294440 10/53 (19%)
PDZ_signaling 462..548 CDD:238492 14/87 (16%)
PDZ_signaling <686..753 CDD:238492
smz-2NP_491965.1 PDZ_signaling 7..77 CDD:238492 19/71 (27%)
PDZ_signaling 114..188 CDD:238492 20/99 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.