DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment baz and FRMPD2

DIOPT Version :9

Sequence 1:NP_001036283.1 Gene:baz / 32703 FlyBaseID:FBgn0000163 Length:1520 Species:Drosophila melanogaster
Sequence 2:NP_001018081.4 Gene:FRMPD2 / 143162 HGNCID:28572 Length:1309 Species:Homo sapiens


Alignment Length:717 Identity:159/717 - (22%)
Similarity:245/717 - (34%) Gaps:241/717 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 PSHQLK-------------EQLLHQQQPHAANGGSSSGNHQPFARSGRLSMQFLGDGNGYKWMEA 275
            |:||.:             |..|...:...|.||..|.:...|...|  |.:...:|.|......
Human   664 PAHQARSKPLIWIQRLSCSENELFVSRLQGAAGGLLSTSMDNFNVDG--SKEAGAEGIGRSPCTG 726

  Fly   276 AEKLQNQ--------------PPAQQTYQQGSHHAGHGQNGAYSSKSLPRESKRKEPLGQAYESI 326
            .|:|::.              ||.|      |.|||        ||:..|:|...||..:.....
Human   727 REQLKSACVIQKPMTWDSLSGPPVQ------SMHAG--------SKNNRRKSFIAEPGREIVRVT 777

  Fly   327 REKDGE--MLLIINEYGSPLGLTALPDKEHGG----GLLVQHVEPGSRAERGR-LRRDDRILEIN 384
            .::|..  ...:|||            .|:.|    |:.:..:.||..||:.: ::...:||.:|
Human   778 LKRDPHRGFGFVINE------------GEYSGQADPGIFISSIIPGGPAEKAKTIKPGGQILALN 830

  Fly   385 GIKLIGLTESQVQEQLRRALESSELRVRVLRG--------DRN---------------------- 419
            .|.|.|.|.:.....::.:.::.||.:...:|        ::|                      
Human   831 HISLEGFTFNMAVRMIQNSPDNIELIISQSKGVGGNNPDEEKNSTANSGVSSTDILSFGYQGSLL 895

  Fly   420 ---RRQQRDSKVAEMVEVATVSPTRKPHAAP------VGTSLQVANTR-KLGRKIEIMLKKGPNG 474
               :.|.|:::..:|..|.::.| |..|...      .|:|...:... ..|....:.|.|....
Human   896 SHTQDQDRNTEELDMAGVQSLVP-RLRHQLSFLPLKGAGSSCPPSPPEISAGEIYFVELVKEDGT 959

  Fly   475 LGFSVTTRDN---PAGGHCPIYIKNILPRGAAIEDGRLKPGDRLLEVDGTPMTGKTQTDVVAILR 536
            ||||||...|   |.||   ||:|:|:|.|.|.::|::..|||||:|||..:.|.|....|..|.
Human   960 LGFSVTGGINTSVPYGG---IYVKSIVPGGPAAKEGQILQGDRLLQVDGVILCGLTHKQAVQCLT 1021

  Fly   537 GMPAGATVRIVVSRQQELAEQADQPAEKSAG---VAVAPSVAPPAVPA---AAAPAPPIPVQKSS 595
            |  .|...|:|:.|:...:.|....|..|.|   .||:...|.|..|:   :....|...|:...
Human  1022 G--PGQVARLVLERRVPRSTQQCPSANDSMGDERTAVSLVTALPGRPSSCVSVTDGPKFEVKLKK 1084

  Fly   596 SARSLFTHQQQSQLNESQHFIDAGSESAASNDSLPPSSNSWHSREELTLHIPVHDTEKAGLG--- 657
            :|.                                                        |||   
Human  1085 NAN--------------------------------------------------------GLGFSF 1093

  Fly   658 VSVKGKTCSNLNASGSSASSGSNGLMKHDGDLGIFVKNVIHGGAASRDGRLRMNDQLLSVNGVSL 722
            |.::.::||:|.:                 || :.:|.:..|..|..:|.:...|.:|:|||.|.
Human  1094 VQMEKESCSHLKS-----------------DL-VRIKRLFPGQPAEENGAIAAGDIILAVNGRST 1140

  Fly   723 RGQNNAEAMETLRRAMVNTPGKHPGTITLLVGR---------------------KILRSASSSD- 765
            .|....|.:..||.|        |..:|||:.|                     |....|:.:| 
Human  1141 EGLIFQEVLHLLRGA--------PQEVTLLLCRPPPGALPELEQEWQTPELSADKEFTRATCTDS 1197

  Fly   766 ----ILDHSNSHSHSHSNSSGGSNSNGSGNNNNSSSNA---------SDNSGATVIYLSPEKREQ 817
                |||..:|...|.|..:|    .|.|....||..|         .:...|:.:..|||....
Human  1198 CTSPILDQEDSWRDSASPDAG----EGLGLRPESSQKAIREAQWGQNRERPWASSLTHSPESHPH 1258

  Fly   818 RC 819
            .|
Human  1259 LC 1260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bazNP_001036283.1 DUF3534 <62..174 CDD:288873
PDZ_signaling 341..412 CDD:238492 16/75 (21%)
CRS1_YhbY <390..>436 CDD:294440 10/78 (13%)
PDZ_signaling 462..548 CDD:238492 35/88 (40%)
PDZ_signaling <686..753 CDD:238492 20/66 (30%)
FRMPD2NP_001018081.4 KIND 15..197 CDD:214801
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..249
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 266..302
B41 346..550 CDD:214604
FERM_C_PTPH13 546..647 CDD:270008
PDZ_signaling 773..857 CDD:238492 20/95 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 859..880 2/20 (10%)
PDZ 947..1034 CDD:214570 36/91 (40%)
PDZ 1078..1167 CDD:214570 31/170 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1204..1228 7/27 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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