DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment baz and Lnx2

DIOPT Version :9

Sequence 1:NP_001036283.1 Gene:baz / 32703 FlyBaseID:FBgn0000163 Length:1520 Species:Drosophila melanogaster
Sequence 2:NP_542985.4 Gene:Lnx2 / 140887 MGIID:2155959 Length:687 Species:Mus musculus


Alignment Length:853 Identity:168/853 - (19%)
Similarity:283/853 - (33%) Gaps:311/853 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 EGIPHGQLHKSYSLTLPKRPPSPSTYSCVKPDSWVTVTHLQTQSGILDPDDCVRDVADDREQILA 96
            |.:|..|...:.||       .|..:.|.: ..|....||....|.:| ||.|..:.  .:.:|.
Mouse     7 EMVPVEQASSTSSL-------DPLCFECGQ-QHWARENHLYNYQGEVD-DDLVCHIC--LQPLLQ 60

  Fly    97 HFDDPGPDPGVPQGGGDGASGSSSVGTGSPDIFRDPTN--TEAPTCPRDLSTPHIEVTSTTSGPM 159
            ..|.|                     .|.....:...|  .|...||.|....|.::...:|   
Mouse    61 PLDTP---------------------CGHTFCHKCLRNFLQEKDFCPLDRKRLHFKLCKKSS--- 101

  Fly   160 AGLGVGLMVRRSSDPNLL--------------ASLKAEGSNKRWSAAAPHYAGGDSPERLFLDK- 209
                  ::|.:..|..|:              ..|:|...|:         ..|.|..|:.|:: 
Mouse   102 ------ILVHKLLDKLLVLCPFSPVCQDVMQRCDLEAHLKNR---------CPGASHRRVDLERR 151

  Fly   210 -------------------AGGQLSPQ--------------------WEED---DDPSHQ----- 227
                               ..|.|.|:                    |.|:   |:|:.:     
Mouse   152 KTSQTQTQIEGETGSTVIDPPGTLPPETDCSGTVPGERNLTPASLPVWTEEPGLDNPAFEESAAA 216

  Fly   228 --LKEQL-----------LHQQQPHAANGGS-SSGNHQP--------------FARSGRLSMQFL 264
              :::.|           :|:..|:...|.| ..||..|              .||.|||   ..
Mouse   217 DSVQQPLSLPEGEITTIEIHRSNPYIQLGISIVGGNETPLINIVIQEVYRDGVIARDGRL---LA 278

  Fly   265 GDG----NGYKWMEA----AEKLQNQP--PAQQTYQQ----GSHHAGHGQNGAYSSKSLPRESKR 315
            ||.    |.|.....    |..:.:||  ..|.|..:    ||....|....|      ||:   
Mouse   279 GDQILQVNNYDISNVSHNHARAVLSQPCSTLQLTVLRERRFGSRANSHADGSA------PRD--- 334

  Fly   316 KEPLGQAYESIREKDGEMLLIINEYGSPLGLTALPDKEHGGGLLVQHVEPGSRAERGRLRRDDRI 380
                 :.:        ::||...:....||:..:...:..|..::..:|.|..|:.|||..:||:
Mouse   335 -----EVF--------QVLLHKRDSTEQLGIKLVRRTDEPGVFILDLLEGGLAAQDGRLNSNDRV 386

  Fly   381 LEINGIKLIGLTESQVQEQLRRALESSELRVRVLRGDRNRRQQRDSKVAEMVEVATVSPTRKP-- 443
            |.|||..|    :....|...:.:::|..||.:                      |::...||  
Mouse   387 LAINGHDL----KHGTPELAAQIIQASGERVNL----------------------TIARPGKPQP 425

  Fly   444 --------------HAAPVGTSLQVANTRKLGRKI-----EIMLKKGPN-GLGFSVTTRDNPAGG 488
                          ||.|...| :..:.:.|.|.:     .|.:||.|: .||.:|........|
Mouse   426 SNGSREAGAHSSSNHAQPPSHS-RPGSHKDLTRCVTCQEKHITVKKEPHESLGMTVAGGRGSKSG 489

  Fly   489 HCPIYIKNILPRGAAIEDGRLKPGDRLLEVDGTPMTGKTQTDVVAILRGMPAGATVRIVVSRQQE 553
            ..||::.::.|.|....|||:|.||.||.::|..:|..:.::.||:|:...|...| |:.:.:.:
Mouse   490 ELPIFVTSVPPHGCLARDGRIKRGDVLLNINGIDLTNLSHSEAVAMLKASAASPAV-ILKALEVQ 553

  Fly   554 LAEQADQPAEKSAGVAVAPSVAPPAVPAAAAPAPPIPVQKSSSARSLFTHQQQSQLNESQHFIDA 618
            :||:|.|.                                        |.:|.|..:|:::  ||
Mouse   554 IAEEAAQA----------------------------------------TEEQPSAFSENEY--DA 576

  Fly   619 GSESAASNDSLPPSSNSWHSREELTLHIPVHDTEKAGLGVSVKGKTCSNL----NASGSSASSGS 679
                     |..||...|                   ||:.....:|.::    :..||...|..
Mouse   577 ---------SWSPSWVMW-------------------LGLPSALHSCHDIVLRRSYLGSWGFSIV 613

  Fly   680 NGLMKHDGDLGIFVKNVIHGGAASRDGRLRMNDQLLSVNGVSLRGQNNAEAMETLRRAMVNTPGK 744
            .|..::..:...|:|.::.|..|..||||:..|.:::|||:|..|.:::..:..|:..      :
Mouse   614 GGYEENHTNQPFFIKTIVLGTPAYYDGRLKCGDMIVAVNGLSTVGMSHSALVPMLKEQ------R 672

  Fly   745 HPGTITLL 752
            :..|:|::
Mouse   673 NKVTLTVI 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bazNP_001036283.1 DUF3534 <62..174 CDD:288873 20/113 (18%)
PDZ_signaling 341..412 CDD:238492 19/70 (27%)
CRS1_YhbY <390..>436 CDD:294440 4/45 (9%)
PDZ_signaling 462..548 CDD:238492 29/91 (32%)
PDZ_signaling <686..753 CDD:238492 17/67 (25%)
Lnx2NP_542985.4 mRING-HC-C3HC3D_LNX2 46..90 CDD:319694 13/67 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..175 3/29 (10%)
NPXY motif 207..210 1/2 (50%)
PDZ 229..315 CDD:214570 21/88 (24%)
PDZ_signaling 336..418 CDD:238492 23/115 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 417..454 6/37 (16%)
PDZ_signaling 463..539 CDD:238492 25/75 (33%)
PDZ_signaling 596..680 CDD:238492 21/89 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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