DRSC/TRiP Functional Genomics Resources

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Protein Alignment baz and cytip

DIOPT Version :9

Sequence 1:NP_001036283.1 Gene:baz / 32703 FlyBaseID:FBgn0000163 Length:1520 Species:Drosophila melanogaster
Sequence 2:XP_003199223.2 Gene:cytip / 100537036 ZFINID:ZDB-GENE-140106-76 Length:343 Species:Danio rerio


Alignment Length:402 Identity:75/402 - (18%)
Similarity:133/402 - (33%) Gaps:129/402 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 QNGAYSSKSLPRESKRKEPLGQAYES-------------------IREKDGEML-LIINEYGSPL 344
            |....|.|:|..|..:...|.|:..:                   :.::|.|:. ..:..||..:
Zfish    36 QRSFSSPKNLNTEGMKGRTLSQSQLARTHSNSLVDYTDPQRTMVVLEKQDNEVFGFEVQTYGLKV 100

  Fly   345 GLTALPDKEHGGGLLVQHVEPGSRAERGRLRRDDRILEINGIKLIGLTESQVQEQLRRALESSEL 409
            ..|::.:.    ...|..|:.||.||...|...|.||.:||:.:.|.|...:.|.:|.:  |:.|
Zfish   101 KNTSMVEM----CTFVCRVQDGSAAETAGLTAGDIILSVNGVSIEGSTHQNIIELIRES--SNTL 159

  Fly   410 RVRVLRGDRNRRQQRDSKVAEMVEVATVSPTRKPHAAPVGTSLQVANTRKLGRK-IEIMLKKGPN 473
            ::..:.|...:|.:.:.|:..:.:.                         |..| :|:.      
Zfish   160 KLETVSGSVMKRIELEKKMHYLKQT-------------------------LREKWVELQ------ 193

  Fly   474 GLGFSVTTRDNPAGGHCPIYIKNILPRGAAIEDGRLKPGDRLLEVD-----GTPMTGKTQTDVVA 533
                |:|.::.                  .:..|.|....:.|.||     .:||....|.    
Zfish   194 ----SLTLKEK------------------RLTQGNLNESAQYLSVDSVMSLSSPMGRSGQR---- 232

  Fly   534 ILRGMPAGATVRIVVSRQQELAEQADQPAEKSAGVAVAPSVAPPAVPAAAAPAPPIPVQKSSSAR 598
                ..:.::.|.:::             :.|...|...||...:.|.:       |::.|.|..
Zfish   233 ----FSSDSSCRSIMT-------------DDSEDGAFMSSVFDDSSPLS-------PIESSGSFF 273

  Fly   599 SL-------FTHQQQSQLNESQHFIDAGSESAASN--DSLPPSSNSWHSREELTLHIPVHDTEKA 654
            .|       .|..:...|..|...:..|.|::.|:  .:||..|.....|:.|...||       
Zfish   274 QLEVGALRPITRTRSISLTGSNSSLSPGWETSPSSLFGTLPRRSRKGSVRKHLLKFIP------- 331

  Fly   655 GLGVSVKGKTCS 666
            ||..||:.:.||
Zfish   332 GLNHSVEEEECS 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bazNP_001036283.1 DUF3534 <62..174 CDD:288873
PDZ_signaling 341..412 CDD:238492 20/70 (29%)
CRS1_YhbY <390..>436 CDD:294440 9/45 (20%)
PDZ_signaling 462..548 CDD:238492 13/91 (14%)
PDZ_signaling <686..753 CDD:238492
cytipXP_003199223.2 PDZ_signaling 78..162 CDD:238492 23/89 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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