DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment baz and whrna

DIOPT Version :9

Sequence 1:NP_001036283.1 Gene:baz / 32703 FlyBaseID:FBgn0000163 Length:1520 Species:Drosophila melanogaster
Sequence 2:XP_002665968.3 Gene:whrna / 100334777 ZFINID:ZDB-GENE-091118-27 Length:939 Species:Danio rerio


Alignment Length:1321 Identity:263/1321 - (19%)
Similarity:394/1321 - (29%) Gaps:528/1321 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   293 SHHAGHGQNGAYSSKSLPRESKRKEPLGQAYESIREKDGEMLLIINEYGSPLGLTALPDKEHGGG 357
            |.::..|.:.|.|::||....|:.........|..|:: :.:..:|.|.|...:..         
Zfish     9 SLNSSSGNSVASSARSLSANVKKLHNALNLLLSDLERE-QFIHCLNVYHSKRNVYD--------- 63

  Fly   358 LLVQHVE-----PGSRAERGRLR----RDDRIL----EINGIKLIGLTESQVQEQLRRALESSEL 409
             |||.::     |..|.....||    |.|::|    ...|:.|                 .||:
Zfish    64 -LVQTLKVILNVPSKRQLLPMLRLVIPRSDQLLFDQYTSEGLYL-----------------KSEI 110

  Fly   410 RVRVLRGDRNRRQQRDSKVAEMVEVATVSPTRKPHAAPVGTSLQVA--------NTRK------- 459
            ..|  .||.:..|          |.|..|||   |.|....| |||        :|..       
Zfish   111 HAR--NGDPDGAQ----------EGANSSPT---HGANFPAS-QVALRGSPDSISTSSDGTATLI 159

  Fly   460 --LGRKI---------EIMLK--KGPNGLGFSVTTRDNPAGGHCPIYIKNILPRGAAIEDGRLKP 511
              |||..         :::||  |...|||||:........|   ||:..:.|...|.::| |:.
Zfish   160 PLLGRNFLPEPPGEIRQVILKRHKSNEGLGFSIRGGSEHGVG---IYVSLVEPGSLAEKEG-LRM 220

  Fly   512 GDRLLEVDGTPMTGKTQTDVVAILRG-------------MPAGATVRIV---VSRQQELAEQADQ 560
            ||::::|:.......|..|.|.:|:|             :|.|.....|   |..|         
Zfish   221 GDQIMKVNDKVFDRVTHADAVKVLKGSKKLCMSVRSVGRIPGGYITNHVYTWVDPQ--------- 276

  Fly   561 PAEKSAGVAVAPSVAPPAVPAAAAPAPPIPVQKSSSARSLFTHQQQSQLNESQHFIDAGSESAAS 625
                  |.:|:|   ||.:.|              ..||....:..||.......:..|.|    
Zfish   277 ------GRSVSP---PPDLLA--------------EHRSATLRRSNSQGRSHMQLLQDGDE---- 314

  Fly   626 NDSLPPSSNSWHSREELTLHIPVHDTEKAGLGVSVKGKTCSNLNASGSSASSGSNGLMKHDGDLG 690
                        .:..|.|      .:...||:.::|         |:..|            ||
Zfish   315 ------------KKVNLVL------DDGRSLGLMIRG---------GAEYS------------LG 340

  Fly   691 IFVKNVIHGGAASRDGRLRMNDQLLSVNGVSLRGQNNAEAMETLRRA-----MVNTPGKHPGTIT 750
            |::..|..|.||...| :::.||:|.|||.|.....:.||:..|:.:     .|...|:.|.|.|
Zfish   341 IYITGVDRGSAAECGG-IKVGDQILEVNGRSFLSIPHDEAVRVLKSSHHLMMTVKDVGRLPHTRT 404

  Fly   751 LLVGRKILRSASSSDILDHSNSHSHSHSNSSGGSNSNGSGNNNNSSSNASDNSGATVIYLSPEKR 815
            ::...|.:.|:..||              ||..|:..|...:..:|::|                
Zfish   405 VVGETKWIASSQISD--------------SSASSSVTGISLDQGASTSA---------------- 439

  Fly   816 EQRCNGGGGGGSAGNEMNRWSNPVLDRLTGGICSSNSAQPSSQQSHQQQPHPSQQQQQQRRLPAA 880
                .||...|.||::               :..|:....|.....:|..|...:.::|      
Zfish   440 ----KGGFYKGVAGSQ---------------VTLSSLVNQSRAMLEEQARHLLTEPERQ------ 479

  Fly   881 PVCSSAALRNESYYMATN-------DNWSPAQMHLMTAHGNTALLIEDDAEPMSPTLPARPHDGQ 938
                     ...||:...       :....|...|...|...:||.|                  
Zfish   480 ---------TMGYYIQEYRDGHVGVEQLVMALFELFNTHAKFSLLSE------------------ 517

  Fly   939 HCNTSSANPSQNLAVGNQGPPINTVPG--TPSTSSNFDATYSSQLSLETNSGVEHFSRDALGRRS 1001
                                    |.|  ||.....||.     |.|               ||.
Zfish   518 ------------------------VRGIVTPQDVEKFDG-----LVL---------------RRE 538

  Fly  1002 ISEKHHAALDARETG--TYQRNKKLREERERERRIQLTKSAVYGGSIESLTARIASANAQFSGYK 1064
            |.     ||.||:.|  .:|.:                      .|:.|....:||::|.|.   
Zfish   539 ID-----ALKARQGGGAGFQDS----------------------FSMVSYPDTLASSSASFM--- 573

  Fly  1065 HAKTASSIEQRETQQQLAAAE----AEARDQLGDLGPSLGMKKSSSLESLQTMVQELQMSDEPRG 1125
                        |...|::|.    ||...:.|.|..|..:...|..|...|       ||.|..
Zfish   574 ------------TNTTLSSARNDGVAENNGEQGSLEHSNALPDISLDEVHST-------SDSPPS 619

  Fly  1126 HQALRAPRGRGREDSLRAAVVSEPDASKPRKTWLLEDGDHEGGFASQRNG-----PFQSSLNDGK 1185
            .:. ..|.|..|..|.:|.:...|.:|                  |.::|     |.:|...:.|
Zfish   620 FKP-PPPPGLQRRPSRKATLSKRPSSS------------------SSQSGLYFTAPSRSHTRESK 665

  Fly  1186 HGCKSSRAKKPSILRGIGHMFRFGKNRKDGVVPVDNYAVNISPPTSVVST-ATSPQLQQQQQQQL 1249
            |      .|.|.....           ..|.:.:|..|..:    ||||. ...|..:.|...:.
Zfish   666 H------PKAPKAFMS-----------PPGTLKIDVPASQL----SVVSQHPIGPFPRVQSPNKA 709

  Fly  1250 QQHQQQQQIPTAALAALERNGKPPAYQPPPPL--------PAPNGVGSNGIHQNDIFNHRYQHYA 1306
            :..|....||..|.......|.||  .|||||        |.|:...||            ||:.
Zfish   710 KPAQSSSPIPPPAPNVPAPPGPPP--PPPPPLPPPSCPDKPTPSSPASN------------QHFV 760

  Fly  1307 NYE--------DLHQQHQQHQISGG--DSTTSISETLSESTLECMRQQVIRQRIKVE-AESRRHQ 1360
            ..|        |:::.....|:.||  ...:...:||||.:             .|: .||.|..
Zfish   761 MVEVHRPNAEPDVNEVRPLPQVRGGTLSQLSDSGQTLSEDS-------------GVDIPESGRLS 812

  Fly  1361 HYHSQRSARS---QDVSMHSTSSGSQPGSLAQPQAQSNGVRPMSSYYEYETVQQQRVGSIKHSHS 1422
            ...|.|.||:   :|......:|...||.|          .|||:...                 
Zfish   813 KDTSPRPARTRAPRDGHGGGETSAKPPGLL----------EPMSTLVR----------------- 850

  Fly  1423 SSATSSSSSPINVPHWKAAAMNGYSPASLNSSARSRGPFVTQVTIREQSSGGIPAHLLQQHQQQQ 1487
               .:.|:|.:.:              ::...|.:|.|....|||:...|.         |...|
Zfish   851 ---VAKSASTLGI--------------AIEGGANTRQPLPRIVTIQRGGSA---------HNCGQ 889

  Fly  1488 LQQQQPTYQTVQKMSGPSQYG 1508
            |:    ..|.:.:::|.|..|
Zfish   890 LK----VGQVILEVNGVSLRG 906

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bazNP_001036283.1 DUF3534 <62..174 CDD:288873
PDZ_signaling 341..412 CDD:238492 15/83 (18%)
CRS1_YhbY <390..>436 CDD:294440 7/45 (16%)
PDZ_signaling 462..548 CDD:238492 27/112 (24%)
PDZ_signaling <686..753 CDD:238492 23/71 (32%)
whrnaXP_002665968.3 HN_L-whirlin_R1_like 25..102 CDD:259822 17/87 (20%)
PDZ_signaling 174..255 CDD:238492 23/84 (27%)
PDZ_signaling 314..394 CDD:238492 26/123 (21%)
HN_L-whirlin_R2_like 459..538 CDD:259823 21/155 (14%)
PDZ_signaling 848..919 CDD:238492 16/106 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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