DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment baz and pard3ba

DIOPT Version :9

Sequence 1:NP_001036283.1 Gene:baz / 32703 FlyBaseID:FBgn0000163 Length:1520 Species:Drosophila melanogaster
Sequence 2:XP_017211256.1 Gene:pard3ba / 100149472 ZFINID:ZDB-GENE-080225-12 Length:1199 Species:Danio rerio


Alignment Length:1603 Identity:360/1603 - (22%)
Similarity:543/1603 - (33%) Gaps:616/1603 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 VTVTHLQ-TQSGILDPDDCVRDVADDREQILAHFD----------DPGPDPGVPQGGGDGASGSS 119
            |...|:: ...|||||||.:.|:.:|:|::.|.|:          .||              ||.
Zfish    45 VRTLHVEYVDGGILDPDDMLSDLVEDKEKLTAVFEKLELQQRALVSPG--------------GSF 95

  Fly   120 SVGTGSPDIFRDPTNTEAPTCPRDLSTPHIEVTSTTSGPMAGLGVGLMVRRSSDPNL-----LAS 179
            :.|..|||......|...|....::......:.|||.         |.||.||||.|     ..|
Zfish    96 ASGRSSPDHSEPELNILHPYLSSEIEVTPSALKSTTP---------LSVRSSSDPALAPPLDAIS 151

  Fly   180 LKAEGSNKRWS--AAAPHYAGGDSPERLFLDKAGGQLSPQWEEDDDPSHQLKEQLLHQQQPHAAN 242
            |.:|.|::..|  .|.|....|.:.::|.:|..                                
Zfish   152 LDSEDSSRPQSTGVAPPVTVKGGAMDKLKVDNL-------------------------------- 184

  Fly   243 GGSSSGNHQPFARSGRLSMQFLGDGNGYKWMEAAEKLQNQPPAQQTYQQGSHHAGHGQNGAYSSK 307
               .|.|.|...||...:::..||                               ||        
Zfish   185 ---ISRNGQDTLRSLTRTVEISGD-------------------------------HG-------- 207

  Fly   308 SLPRESKRKEPLGQAYESIREKDGEMLLIINEYGSPLGLTALPDKEHGGGLLVQHVEPGSRAERG 372
                      |||              :.:..|.|.|....|       ||.::.:|..||:||.
Zfish   208 ----------PLG--------------IKVIPYCSSLSGRTL-------GLNIRAIEKNSRSERE 241

  Fly   373 RL-RRDDRILEINGIKLIGLTESQVQEQLRRALESSE---LRVRVLRGDRNRRQQRD-------- 425
            :: ..|:.|::||..:||..:.:|.||..|:|:.||.   :.:.||......|.::.        
Zfish   242 KIFEEDECIVQINDAELIDKSFAQSQEVFRQAMSSSSTSTVHLEVLPVANKLRYEKSLIGQLFNS 306

  Fly   426 -------------SKVAEMVEVATVSPTRKPHAA-----------------------------PV 448
                         ..|.::....|.:|:.:|.|:                             ||
Zfish   307 TETNPAVPKIKSPFLVRKLTPSNTATPSPEPAASQTPPIKEEELQRARHTPVELNHQSSTPSPPV 371

  Fly   449 GTSLQVAN--------------TRKLGRKIEIMLKKGPNGLGFSVTTRDNPAGGHCPIYIKNILP 499
            .||..:.:              |:|.|:::.|.||||..||||:|.|||:...|..||.:|:|||
Zfish   372 STSPTLRDHSESPALASVVHMVTKKAGKRMRIDLKKGTEGLGFTVVTRDSSLHGPGPIMVKSILP 436

  Fly   500 RGAAIEDGRLKPGDRLLEVDGTPMTGKTQTDVVAILRGMPAGATVRIVVSRQQELAEQADQPAEK 564
            ||||::|||||.|||:|||:|..:||:||.::||:||....|.||.::|.||:|..     |.| 
Zfish   437 RGAAVKDGRLKSGDRILEVNGVDITGRTQEELVAMLRSTKLGETVSLIVGRQEEFL-----PRE- 495

  Fly   565 SAGVAVAPSVAPPAVPAAAAPAPPIPVQKSSSARSLFTHQQQSQLNESQHFIDAGSESAASNDSL 629
                 :...|:.|.|                                             |.|  
Zfish   496 -----LKGEVSGPLV---------------------------------------------SED-- 508

  Fly   630 PPSSNSWHSREELTLHIPVHDTEKAGLGVSVKGKTCSNLNASGSSASSGSNGLMKHDGDLGIFVK 694
                    .||:|...:|::|:..||||||:||         ..|..:|.        |||||:|
Zfish   509 --------GREQLMFEVPLNDSGSAGLGVSLKG---------NKSRETGE--------DLGIFIK 548

  Fly   695 NVIHGGAASRDGRLRMNDQLLSVNGVSLRGQNNAEAMETLRRAMVNTPGKHPGTITLLVGRKILR 759
            ::||||||::|||||:||||::||..||.|::|.:||||||.:| :|.|...|||.|:|.|.:.|
Zfish   549 SIIHGGAANKDGRLRVNDQLIAVNSESLVGRSNHDAMETLRHSM-STEGNLRGTIQLVVLRSLER 612

  Fly   760 SASSSDILDHSNSHSHSHSNSSGGSNSNGSGNNNNSSSNASDNSGATVIYLSPEKREQRCNGGGG 824
            |.:.                           .|..:|.:|                         
Zfish   613 SPAQ---------------------------ENYEASQSA------------------------- 625

  Fly   825 GGSAGNEMNRWSNPVLDRLTGGICSSNSAQPSSQQSHQQQPHPSQQQQQQRRLPAAPVCSSAALR 889
                    ||..:|||.|                  |...|:.:                   ..
Zfish   626 --------NRNDSPVLRR------------------HHHHPNSN-------------------TT 645

  Fly   890 NESYYMATNDNWSPAQMHLMTAHGNTALLI-----EDDAEPMSPTLPARPHDGQHCNTSSANPSQ 949
            |.|...:|.:..:||...   .||....|:     |||..|                     |..
Zfish   646 NNSVPQSTVNESAPAPYR---PHGGRPELLEVDYGEDDFPP---------------------PPS 686

  Fly   950 NLAVGNQGPPINTVPGTPSTSSNFDATYSSQLSLETNSGVEHFSRDALGRRSISEKHHAALDARE 1014
            :|.:....||....|..|....      .||:|..||.                           
Zfish   687 DLDLLETNPPHKHQPNRPEMEP------FSQVSHPTNQ--------------------------- 718

  Fly  1015 TGTYQRNKKLREERERERRIQLTKSAVYGGSIESLTARIASANAQFSGYKHAKTASSIEQRETQQ 1079
              .|.:.:|..|                                    |...||:.|::....:.
Zfish   719 --QYPQRQKAPE------------------------------------YSTNKTSKSMDLVADES 745

  Fly  1080 QLAAAEAEARDQLGD----LGPSLGMKKSSSLESLQTMVQELQMSD----EPRGHQALRAPRGRG 1136
            .:|:.:.:..:.:..    |||.||::||||||||||.::|:...:    .||.|..    ||||
Zfish   746 NMASIQGQRPEPISSNGTALGPRLGLRKSSSLESLQTAMEEVSKDEVPFHRPRAHMV----RGRG 806

  Fly  1137 REDSLRAAVVSEPDASKPRKTWLLEDGDHEGGFASQRNGPFQSSL-----NDGKHGCKSSRAKKP 1196
            ...|.|.|:  :.....|.:.   ||.|.|..  |.|:.|..||.     ||.|...|.::.||.
Zfish   807 CNMSFRYAI--DKSYEGPSEA---EDDDSEED--SGRDTPASSSSRQELDNDRKVKKKKTKKKKE 864

  Fly  1197 SILRGIGHMFRFGKNRKDGVVPVDNYAVNISPPTSVVSTATSPQLQQQQQQQ------------- 1248
            ...:           :||.....|....  .....::|..|||.|:..|:..             
Zfish   865 KKTK-----------KKDEAEDPDKKTK--KKGFGLLSMETSPDLRSVQKNMFGRKNKEDKTKSK 916

  Fly  1249 ------LQQHQQQQQIPTAALAALERNGKPPAYQPPPPLPAPNGVGSNGIHQNDIFNHRYQHYAN 1307
                  :.:.:..:..|...|:..|||.           |||..|....:..:|: :..|....|
Zfish   917 AKQMVAVSEEEVDKSEPELFLSKSERNS-----------PAPERVIFPDVEDDDL-DPNYARINN 969

  Fly  1308 YEDLHQQHQQHQISGGDSTTSIS---------ETLSESTLECMRQQVIRQRI---KVEAESRRHQ 1360
            :.: .....|..:..|..|.:.:         |..:|..||.:..:|.:||.   |.|:...|.|
Zfish   970 FRN-PPASSQSPLPPGAPTNNYAQPAVPAPSREPPNEDALEGLYAKVNKQRTAPPKTESNEERLQ 1033

  Fly  1361 HYHSQ----RSARSQDVSMHSTSSGSQPGSLAQPQAQSNGVRPMSSYYE----YETVQQQRVGSI 1417
            ...:|    |.|.|.:...........|..:..|.:     |....|.:    |.:|.:::.   
Zfish  1034 QIRNQLQQIRPAPSYEDLTARRRPEYDPSRIRGPDS-----RTAPRYNDADRLYTSVPRKKP--- 1090

  Fly  1418 KHSHSSSATSSSSSPINVPHWKAAAMNGYSPASLNSSARSRGPFVTQVTIREQSSGGIPAHLLQQ 1482
            ...:.:...|:...|:..|          :|...|.....|.| |.:.|  |......|:...:|
Zfish  1091 VDEYPNQNWSNQRDPVLYP----------NPIYDNPPRSPRLP-VPKPT--ETPGAHYPSSPAKQ 1142

  Fly  1483 HQQQQL-------QQQQPTYQTVQ----KMSGPSQYGSAAGSQ 1514
            ..:|.:       .::.|.|:.:.    :.:.|.:|......|
Zfish  1143 MMRQDVPPSSNPGAREPPRYEALNQGNYRTASPDRYSPYTDEQ 1185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bazNP_001036283.1 DUF3534 <62..174 CDD:288873 32/118 (27%)
PDZ_signaling 341..412 CDD:238492 23/74 (31%)
CRS1_YhbY <390..>436 CDD:294440 11/69 (16%)
PDZ_signaling 462..548 CDD:238492 47/85 (55%)
PDZ_signaling <686..753 CDD:238492 40/66 (61%)
pard3baXP_017211256.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595876
Domainoid 1 1.000 84 1.000 Domainoid score I8197
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 354 1.000 Inparanoid score I2213
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D387987at33208
OrthoFinder 1 1.000 - - FOG0002688
OrthoInspector 1 1.000 - - otm26103
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR16484
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2449
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
99.000

Return to query results.
Submit another query.