powered by:
Protein Alignment Chchd2 and AT5G09570
DIOPT Version :9
Sequence 1: | NP_573196.1 |
Gene: | Chchd2 / 32701 |
FlyBaseID: | FBgn0260747 |
Length: | 170 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_196519.1 |
Gene: | AT5G09570 / 830816 |
AraportID: | AT5G09570 |
Length: | 139 |
Species: | Arabidopsis thaliana |
Alignment Length: | 168 |
Identity: | 43/168 - (25%) |
Similarity: | 64/168 - (38%) |
Gaps: | 49/168 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 GRSASPPPSTRRTAPVQARAPAPAPAPVQTRAPAPAASAPVPAPMSAPPSAVGMPAPQQPSMFQQ 69
||| |.|.:.|..||:|.|... .|||.|| :|.||:.| |....
plant 8 GRS-----SYRPSRPAAARSPPPQSV---NRAPPPA---------TAQPSSGG-------SFLGN 48
Fly 70 MAAT-AGGVA--VGSAIGHTVGHGLTSLFSGSGDKE--AAAPAPAAAAPAPQQPYYAQQQQPNEP 129
:.|: ..|:| .|:|.||.| :.|:......|. ..:..|:|| ..
plant 49 IGASITEGLAWGTGTAFGHRV---VDSVMGPRTFKHETVVSQVPSAA----------------NT 94
Fly 130 QGACAWELKQFIQCAQG-QADLTLCEGFNEALRQCKQS 166
..||....|.|..|... .:|::.|:.:.:.|.:||::
plant 95 MTACDIHSKAFQDCVNHFGSDISKCQFYMDMLSECKKN 132
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Chchd2 | NP_573196.1 |
CHCH |
133..165 |
CDD:284221 |
8/32 (25%) |
AT5G09570 | NP_196519.1 |
CHCH |
98..132 |
CDD:399611 |
9/33 (27%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4090 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
1 |
1.010 |
- |
- |
|
QHG54220 |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1611117at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR13523 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 4.020 |
|
Return to query results.
Submit another query.