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Protein Alignment Chchd2 and gpat3
DIOPT Version :9
Sequence 1: | NP_573196.1 |
Gene: | Chchd2 / 32701 |
FlyBaseID: | FBgn0260747 |
Length: | 170 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001008432.1 |
Gene: | gpat3 / 493261 |
XenbaseID: | XB-GENE-993435 |
Length: | 154 |
Species: | Xenopus tropicalis |
Alignment Length: | 172 |
Identity: | 82/172 - (47%) |
Similarity: | 102/172 - (59%) |
Gaps: | 21/172 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MVRRGRSASPPPSTRRTAPVQARAPAPAPAPVQTRAPAPAASAPVPAPMSAPPSAVG--MPAPQQ 63
|.|..|| .|.|.||..:||||..||| |.|:.| |||::..|||:| ..||:|
Frog 1 MPRGSRS-----RTSRVAPPASRAPAMRPAP-------PPAAHP-PAPVAQAPSALGPAAAAPRQ 52
Fly 64 PSMFQQMAATAGGVAVGSAIGHTVGHGLTSLFSGSGDKEAAAPAPA-AAAPAPQQPYYAQQQQPN 127
|.:..|||.||.|||||||:|||:||.:|..|.|. .:|.||.| .....|.||.|.||||
Frog 53 PGLMAQMATTAAGVAVGSAVGHTIGHAITGGFGGG---SSAEPARADITYQEPAQPMYQQQQQ-- 112
Fly 128 EPQGACAWELKQFIQCAQGQADLTLCEGFNEALRQCKQSHHL 169
.....|.:|:|||::|||.|:||.|||||.|.|:||:.::.|
Frog 113 SQYTPCQYEMKQFLECAQNQSDLKLCEGFGEVLKQCRFANGL 154
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Chchd2 | NP_573196.1 |
CHCH |
133..165 |
CDD:284221 |
20/31 (65%) |
gpat3 | NP_001008432.1 |
CHCH |
118..151 |
CDD:310983 |
20/32 (63%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
134 |
1.000 |
Domainoid score |
I4957 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
1 |
1.000 |
- |
- |
|
H49449 |
Inparanoid |
1 |
1.050 |
135 |
1.000 |
Inparanoid score |
I4457 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1611117at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0001898 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm48209 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R2188 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X1616 |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
9 | 9.090 |
|
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