DRSC/TRiP Functional Genomics Resources

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Protein Alignment Chchd2 and LOC3290003

DIOPT Version :10

Sequence 1:NP_573196.1 Gene:Chchd2 / 32701 FlyBaseID:FBgn0260747 Length:170 Species:Drosophila melanogaster
Sequence 2:XP_556226.4 Gene:LOC3290003 / 3290003 VectorBaseID:AGAMI1_005538 Length:164 Species:Anopheles gambiae


Alignment Length:170 Identity:57/170 - (33%)
Similarity:85/170 - (50%) Gaps:22/170 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVRRGRSASPPPSTRRTAPVQARAPAPAPAPVQTRAPAPAASAPVPAPMSAPPSAVGMPA-PQQP 64
            |.||...|...|.:|:|...::.......:     |..|::.:....|....|||:  || |..|
Mosquito     1 MPRRDTRARTVPPSRKTTDTKSHHGGTGKS-----ASPPSSGSSAAEPTKPAPSAI--PATPAAP 58

  Fly    65 SMFQQMAATAGGVAVGSAIGHTVGHGLTSLFSGSGDKEAAAPAPAAAAPAPQQPYYAQQQ----- 124
            .:|.||||||||||:||.:|..:|    .||..:..|:     |.:|....::...|.:|     
Mosquito    59 GLFSQMAATAGGVALGSVLGRALG----GLFERTEPKD-----PQSADALEKEKQSAVEQGAAVT 114

  Fly   125 QPNEPQGACAWELKQFIQCAQGQADLTLCEGFNEALRQCK 164
            :.:.|...|..|:|||:.|...:||:.:||||.||::|||
Mosquito   115 EKSAPPDVCNLEIKQFLTCVDREADVKICEGFKEAMQQCK 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Chchd2NP_573196.1 CHCH 133..165 CDD:429096 17/32 (53%)
LOC3290003XP_556226.4 None

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