DRSC/TRiP Functional Genomics Resources

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Protein Alignment Chchd2 and Chchd2

DIOPT Version :10

Sequence 1:NP_573196.1 Gene:Chchd2 / 32701 FlyBaseID:FBgn0260747 Length:170 Species:Drosophila melanogaster
Sequence 2:XP_061509856.1 Gene:Chchd2 / 1277414 VectorBaseID:AGAMI1_001963 Length:191 Species:Anopheles gambiae


Alignment Length:206 Identity:102/206 - (49%)
Similarity:116/206 - (56%) Gaps:52/206 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVRRGRSASPPPSTRRTAPVQARAPAPAPAPVQTRAPAPAASAPVPAPMSAPPSAVGMPAPQQPS 65
            |.||||:|||||:.|| ||:.|..|||||.....:..||||   |.|||:||        .|.|.
Mosquito     1 MPRRGRTASPPPAARR-APMAAAPPAPAPKQPVVQQAAPAA---VAAPMAAP--------SQGPG 53

  Fly    66 MFQQMAATAGGVAVGSAI-----------------------------------GHTVGHGLTSLF 95
            :..||||||||||:|||:                                   ||||||.||.:|
Mosquito    54 LMAQMAATAGGVAIGSAVVSVRPPAALPHPKHKHTASVCNCLVSFFAVRFLFQGHTVGHALTGMF 118

  Fly    96 SGSGDKEAA--APAPAAAAPAPQQPYYAQQQQPNEPQGACAWELKQFIQCAQGQADLTLCEGFNE 158
            |||..||||  |.||...||||.   |.||||.....|.|:||:|||:.|||.|:||||||||||
Mosquito   119 SGSDSKEAAPVAAAPQQYAPAPA---YPQQQQQAGETGPCSWEMKQFLSCAQNQSDLTLCEGFNE 180

  Fly   159 ALRQCKQSHHL 169
            ||||||..||:
Mosquito   181 ALRQCKVQHHM 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Chchd2NP_573196.1 CHCH 133..165 CDD:429096 25/31 (81%)
Chchd2XP_061509856.1 None

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