DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS5a and RPS5B

DIOPT Version :10

Sequence 1:NP_523382.1 Gene:RpS5a / 32700 FlyBaseID:FBgn0002590 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_181264.1 Gene:RPS5B / 818304 AraportID:AT2G37270 Length:207 Species:Arabidopsis thaliana


Alignment Length:214 Identity:156/214 - (72%)
Similarity:181/214 - (84%) Gaps:11/214 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AAPMEAEVAETILETNVVSTTELPEIKLFGRWSCDDVTVNDISLQDYISVK-EKFARYLPHSAGR 79
            :|.::||:.:.:  ||        |:|||.|||.|||:|.||||.|||.|: .|.|.::||:|||
plant     4 SAEIDAEIQQQL--TN--------EVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGR 58

  Fly    80 YAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSAIINSG 144
            |:.|||||||||||||||.||||.||||||||||.|||||:.||||||:..||:|:::.||:|||
plant    59 YSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIVNSG 123

  Fly   145 PREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSS 209
            ||||:||||.||.|||||||:||||||||||:||.||||||||||||||||||||||||||||||
plant   124 PREDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADELINAAKGSS 188

  Fly   210 NSYAIKKKDELERVAKSNR 228
            ||||||||||:|||||:||
plant   189 NSYAIKKKDEIERVAKANR 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS5aNP_523382.1 uS7_Eukaryote 42..228 CDD:271246 148/186 (80%)
RPS5BNP_181264.1 uS7_Eukaryote 20..207 CDD:271246 148/186 (80%)

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