DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS5a and mRpS7

DIOPT Version :10

Sequence 1:NP_523382.1 Gene:RpS5a / 32700 FlyBaseID:FBgn0002590 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_523537.1 Gene:mRpS7 / 34412 FlyBaseID:FBgn0032236 Length:218 Species:Drosophila melanogaster


Alignment Length:190 Identity:53/190 - (27%)
Similarity:81/190 - (42%) Gaps:37/190 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 NDISLQDYISVKEK--------FARYLPHSAGRYAAKRFRKAQCPIVERLTCSLMMKGRNNGKKL 111
            ||:|...::.:|..        |.....|....|..|:...|       |..:|:.|        
  Fly    42 NDLSKLYHVPIKAAVNKSSDTIFHDDTKHKMINYITKKGNSA-------LARTLLSK-------- 91

  Fly   112 MACRIVKHS-FEIIHLLTGE------NPLQILVSAIINSGPREDSTRIGRAGTVRRQAVDVSPLR 169
             ...::|.: .|.::|..||      ||..:|..|:.|..|....|.|.|.|...:..|.::..|
  Fly    92 -TLELIKRTQTEHMNLAKGEKTTINTNPETLLKQAVENCRPLLQVTAIKRGGVTYQVPVPITTKR 155

  Fly   170 RVNQAI-WLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 228
            ....|: ||| ..|||.. |.: ::.|.||.|:::||.|...  .||:||:|.|:.:|||
  Fly   156 SYFLAMKWLL-EAAREKE-RKV-SLPEKLAWEILDAAHGQGR--VIKRKDDLHRLCESNR 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS5aNP_523382.1 uS7_Eukaryote 42..228 CDD:271246 51/188 (27%)
mRpS7NP_523537.1 uS7_Mitochondria_Mammalian 21..216 CDD:271249 53/190 (28%)

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