DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS5a and rps5

DIOPT Version :9

Sequence 1:NP_001285360.1 Gene:RpS5a / 32700 FlyBaseID:FBgn0002590 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_594279.1 Gene:rps5 / 2542939 PomBaseID:SPAC8C9.08 Length:203 Species:Schizosaccharomyces pombe


Alignment Length:196 Identity:141/196 - (71%)
Similarity:162/196 - (82%) Gaps:2/196 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 VSTTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGRYAAKRFRKAQCPIVERLT 97
            ||..|...||||.::..:.|.|.||||.|||::..  .:.|||:|||:..||||||:|.||||||
pombe    10 VSLDENGSIKLFNKFPFEGVEVKDISLVDYITIGN--GQPLPHTAGRFQTKRFRKARCFIVERLT 72

  Fly    98 CSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSAIINSGPREDSTRIGRAGTVRRQA 162
            .||||.||||||||:|.|||||:||||.|||.:||||:||.|:...||||||||||.||||||||
pombe    73 NSLMMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAVAACGPREDSTRIGSAGTVRRQA 137

  Fly   163 VDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSN 227
            ||||||||||||:.|:..|||||||||:|:|:||||:|:||||||||||||||||||||||||||
pombe   138 VDVSPLRRVNQALALITIGAREAAFRNVKSISECLAEEIINAAKGSSNSYAIKKKDELERVAKSN 202

  Fly   228 R 228
            |
pombe   203 R 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS5aNP_001285360.1 uS7_Eukaryote 42..228 CDD:271246 135/185 (73%)
rps5NP_594279.1 uS7_Eukaryote 19..203 CDD:271246 135/185 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 226 1.000 Domainoid score I522
eggNOG 1 0.900 - - E1_COG0049
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H783
Inparanoid 1 1.050 268 1.000 Inparanoid score I717
OMA 1 1.010 - - QHG62189
OrthoFinder 1 1.000 - - FOG0003144
OrthoInspector 1 1.000 - - mtm9304
orthoMCL 1 0.900 - - OOG6_100920
Panther 1 1.100 - - O PTHR11205
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2272
SonicParanoid 1 1.000 - - X2112
TreeFam 1 0.960 - -
1413.860

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