DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS5a and mrps-7

DIOPT Version :10

Sequence 1:NP_523382.1 Gene:RpS5a / 32700 FlyBaseID:FBgn0002590 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_502782.2 Gene:mrps-7 / 190379 WormBaseID:WBGene00013324 Length:222 Species:Caenorhabditis elegans


Alignment Length:240 Identity:41/240 - (17%)
Similarity:78/240 - (32%) Gaps:67/240 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VAENVVETFEEPAAPMEAEVAETILETNVVSTTELPEIKLFGRWSCDDVTVNDISLQDYISVKEK 68
            |..:.|...:|...|::::.....|....:.:...|                 :..:|:  |.:|
 Worm    28 VFRDPVTNVQELRKPLDSDDERNFLFLKAMKSDATP-----------------VFYRDH--VIDK 73

  Fly    69 FARYLPHSAGRYAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPL 133
            ..|.......:..:::...:...|::|.......|.....||         |.|:       :|.
 Worm    74 LIRVCTKDGEKETSRKNVLSALEIIKRRQYKAWAKASEEEKK---------SIEL-------DPF 122

  Fly   134 QILVSAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAE-C- 196
            .:....|.|..|......:.|.||..:....:.               ..||.||.:|.:.: | 
 Worm   123 LVAKKGIKNCHPLMKLQGVTRGGTTYQVPFPIE---------------EPEAEFRAMKMMRDICR 172

  Fly   197 -------------LADELINAAKGSSNSYAIKKKDELERVAKSNR 228
                         ||.||:.|::...::  |:.|.||.:..::||
 Worm   173 VRSKHGETHFKDILATELLAASQNEGST--IQAKQELHKTCEANR 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS5aNP_523382.1 uS7_Eukaryote 42..228 CDD:271246 33/200 (17%)
mrps-7NP_502782.2 uS7_Mitochondria_Mammalian 23..221 CDD:271249 41/240 (17%)

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