DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5004 and phldb2a

DIOPT Version :9

Sequence 1:NP_573195.1 Gene:CG5004 / 32698 FlyBaseID:FBgn0260748 Length:1247 Species:Drosophila melanogaster
Sequence 2:XP_021335100.1 Gene:phldb2a / 570807 ZFINID:ZDB-GENE-091118-9 Length:1088 Species:Danio rerio


Alignment Length:1238 Identity:273/1238 - (22%)
Similarity:436/1238 - (35%) Gaps:445/1238 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   280 VNSDI-----NNGPATGNN-SGTGGGAELEDML------KICTE-----YADRN--NSMPSTHNV 325
            :|:|.     |.|...|:: .||...|||::::      |...|     .|||.  ...|.....
Zfish    16 LNTDTTKFHSNGGSLVGSSLRGTRSKAELQELMESLQRRKSALEASLKATADRGYLTLSPPPSPQ 80

  Fly   326 SSTSSITSSPIVQNRI------KTNGSLPRDKNK-----SPFPQQAGVASSANISLL-------- 371
            |::|.:...|.:..|:      .::.|:|...::     ||.|.|......:..|||        
Zfish    81 SASSYLQDRPPLSIRVPSPYSPSSSLSMPPSPHQSERPISPVPNQTRARHQSQDSLLLCHSSEGR 145

  Fly   372 -------------SSSSGYENVRLLGPNRVEINGQIHVPASAGDGGSSSGVSSNALAPTAAVRAS 423
                         .|||.|.|..||...|             |..|::|..||..|......|..
Zfish   146 HPNSSNPLLTMWNGSSSSYGNDALLSSRR-------------GPSGAASMPSSPRLGRRLLARDG 197

  Fly   424 HE----NLNQNHSAT-----TGG--KYVPQSPRTKIRTNCMSPKKDVSFGNAFALAISPPPLASS 477
            ..    :|.|...:|     .||  :.:|:..|.......:.|::......:|.....||.:...
Zfish   198 ESPIEPSLRQRKYSTGSLNGLGGHSRSLPRLYRGDAPMLSLPPRRTTKPRRSFPSMEKPPDVTVI 262

  Fly   478 A-VVSTSKPIPIPSM---------------------VKPPLAPKP------PAPNQQRDYEQLFK 514
            | |.|:|:...:.|:                     :.|.:.|:.      ....:.|||.|..:
Zfish   263 ANVNSSSRRASLCSVGSAPCLDLGVGERRLSFGKGGLGPGMGPRRGSISSLSGKEELRDYHQRQR 327

  Fly   515 SFERKQQQLDRM-------------------VPAKRSNKNINNLTLNLQSV-------------- 546
            ....::|:::|:                   |....|..|.:.:: :||.:              
Zfish   328 DERLREQEVERLERQRLETILCLCSELGRTEVSRMESEPNTSAVS-DLQKINRELEKLQVSDDES 391

  Fly   547 -----------------------------------ESQTQSPKPS-RKPAPAPRSIHLEQRQRRE 575
                                               ||:.|||..| |..||:| |.||..:...:
Zfish   392 VFSESASVSVDGGVFLGKSRGEILNQRQRRVSGHRESRPQSPSSSMRSTAPSP-SPHLRCKVSED 455

  Fly   576 LIQRRKQLKRELAELPPSAGIEGLELKL----------------------GEQ--PLAPSASPRL 616
            :..|::..:.|...:.....||.||.|:                      |||  .:....|.:.
Zfish   456 MQLRQEVTRIEEERIQVLNNIEELEQKIRDLDTQMDESIREMEVERALLDGEQEAEVTQLQSDKE 520

  Fly   617 QLQALQNRVCRLE--AQRNATRVMEENQQAKLKQSIEIKQDQLKKLRAMLKQKPN--NAC---LK 674
            .|:.|..::..:|  :|||         |.:.|..:|.::|::::|..::.::..  ::|   ||
Zfish   521 MLEQLNEKMGNMEKNSQRN---------QTQDKALLEAERDKVERLAELISEQKTQLDSCPEALK 576

  Fly   675 EELQ-------------LVCESLESDRKTFEDLEFQYFEEESEHHASHEEFKRQEQRLMLE-AE- 724
            |:||             |..|:||:::|.|||:|||..|:||   ...||.:.|.|:|:.| || 
Zfish   577 EQLQNQLSRLWKNRLFLLDTEALEAEKKRFEDMEFQQLEKES---CQDEETESQMQQLLREIAEY 638

  Fly   725 ----------LAALRIQIGPDEEEPGSPTSPGSTGSNLVNGVMSQSLFGSAELLCPKRRNQEDLM 779
                      |..|:.|                                |.::....:|.:|:.:
Zfish   639 QRSVVSRKERLLTLKKQ--------------------------------STQITQQAQREKENFL 671

  Fly   780 SKSVNENMFYNHKIE-ANTSTPKRLPLQLFEDLAGGSCEQISFNLSLQGDRFEVNPL-------- 835
            .:  ..|:.|..:.| .|.|:.:|    .:.:|.||..             |.:||:        
Zfish   672 KE--KSNLIYMLQRERENLSSLER----KYAELTGGQA-------------FPLNPVSMKEHFRT 717

  Fly   836 --ERR----------------VPSQDD----------IDRSC--KVAND--------APISASQG 862
              |||                .|.:.:          ::||.  ||...        .|:|.|..
Zfish   718 LEERRRSNGIKEGGVLLSDNGTPRKRERQSSGTLNSALNRSLSPKVRQQIRHIGKPHMPLSQSSS 782

  Fly   863 ASTKIFDSIMEIERN---RKLLLAQQGHQVIEHERQKMYDLKKKSHDEARTQYLLSTQQSMEQQR 924
            ..:.:..::....|:   |:||.| .|...:..|||:|.::..::..|        |...:|...
Zfish   783 CGSVLPRTLSVNSRDLDTRRLLKA-AGQLYLNDERQRMSEMSNRAVSE--------TNVFLEPFH 838

  Fly   925 QLESDANGGKDAKLFEKTELQKLNQKPGEPVDDQVQKIAGDKENNVQNRKSTGSSPTTTTTTTTG 989
            .|::..|  .|....:.||                     ..|.::     :..||...::.:|.
Zfish   839 YLDNGHN--FDTMSVDSTE---------------------SLETSI-----SACSPDNISSASTA 875

  Fly   990 GGTTPQQQ----RHSQPE----LEHHAIALGIGGGGSGGAGGANQMVARSPRPLSEANNCDATIE 1046
            .....::.    |.:|.|    |||.                ...|..|                
Zfish   876 NMAKIEEMERMLREAQAEKHRLLEHR----------------ERDMELR---------------- 908

  Fly  1047 APKFANGMDSSASPAVADNKRASSNSQDTASAGSGSGNSGSGGSTASDRKRVLPKHQRPLTRYLP 1111
                        ..|:.|.:|.....:....            ...|.|::::.:..||||||||
Zfish   909 ------------RQALEDERRRREELERRLQ------------EETSRRQKLVERESRPLTRYLP 949

  Fly  1112 IFSPDLNLRHHIETAGHQIDPCPHVFVDAHSCRGYLHKLGATFHAWSRRWFVLDRQRSALIYYSD 1176
            :...:.:||.|||.|||..:.|.|:.:...:|||:|.|:|.....|.:||||.||.|..|.||:|
Zfish   950 VRKDEFDLRGHIEAAGHHPETCFHLAITEKTCRGFLVKMGGKIKTWKKRWFVFDRNRRTLAYYAD 1014

  Fly  1177 KSERKPRGGAYFATIDEVYLDHL-NASKSGRPHCTFIVKTKKRSYNLQAASDSAARIWIDAIITG 1240
            |.|.|.:|..||..|:|||.||| ||.||..|..||.|||..|.|.:.|.|..|.|||:|.|:||
Zfish  1015 KHETKMKGVIYFQAIEEVYYDHLKNAHKSPNPSLTFSVKTHDRVYYMVAPSPEAMRIWMDVIVTG 1079

  Fly  1241 AQG 1243
            |:|
Zfish  1080 AEG 1082

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5004NP_573195.1 FHA 41..104 CDD:278899
PH-like 1142..1242 CDD:302622 53/100 (53%)
PH 1143..1237 CDD:278594 50/94 (53%)
phldb2aXP_021335100.1 GlgA 224..>647 CDD:333024 87/436 (20%)
SMC_N <457..>698 CDD:330553 62/290 (21%)
PH_PHLDB1_2 977..1081 CDD:270192 53/103 (51%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2C17U
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D45023at33208
OrthoFinder 1 1.000 - - FOG0003925
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12156
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5713
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
66.000

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