DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5004 and cmet

DIOPT Version :9

Sequence 1:NP_573195.1 Gene:CG5004 / 32698 FlyBaseID:FBgn0260748 Length:1247 Species:Drosophila melanogaster
Sequence 2:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster


Alignment Length:899 Identity:173/899 - (19%)
Similarity:312/899 - (34%) Gaps:278/899 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 YAKGVGSNGGYWNV---PSNAAIY----KEQHQQQHQQAPQDLLTKVNNDRYDRYPKAGGLQIYS 276
            :|.|..|:|..:.:   ..|..:.    ||..||...:..:|.|.:|           |.::||:
  Fly    80 FAYGQTSSGKTYTMMGDEQNPGVMVLAAKEIFQQISSETERDFLLRV-----------GYIEIYN 133

  Fly   277 ------MNGVNSDI-----NNGPATGNNSGTGGGAELEDMLKICTEYADRNNSMPSTHNVSSTSS 330
                  :|..|.|:     .||....|.......:|::.:..:|....:|.....:.:..||.|.
  Fly   134 EKIYDLLNKKNQDLKIHESGNGIVNVNCEECIITSEVDLLRLLCLGNKERTVGETNMNERSSRSH 198

  Fly   331 ITSSPIVQNRIKTNGSLPRDKNKSPFPQQAGVASSANISLLSSSSGYENVRLLGPNRVEINGQIH 395
            .....|:::| |::.|          ...|.:.|..|:           |.|.|..|.:..|.  
  Fly   199 AIFKIIIESR-KSDHS----------DDDAVIQSVLNL-----------VDLAGSERADQTGA-- 239

  Fly   396 VPASAGDGGSSSGVSSNALAPTAAVRASHENLNQNHSATTGGKYVPQSPRTKIRTNCMSPKKDVS 460
            ..|...:||.   ::.:.|..:..:::..||.:...:.....|.      |:|....:.      
  Fly   240 RGARLKEGGH---INKSLLFLSNVIKSLSENADNRFTNYRDSKL------TRILQASLG------ 289

  Fly   461 FGNAFA---LAISPPPLASS----AVVSTSKPIPIPSMVKPPLAPKPPAPNQQRDYEQLFKSFER 518
             ||||.   ..|.|..:..|    :..:.:|.|.|           .|..|:......:.|..||
  Fly   290 -GNAFTSIICTIKPSIMEESQSTLSFATRAKKIRI-----------KPQVNEMVSDATMMKRLER 342

  Fly   519 KQQQL-DRMVPAKRSNKN---INNLT----------------------------------LNLQS 545
            :.:.| |::...:|.|:|   :.:|.                                  .:|:.
  Fly   343 EIKVLKDKLAEEERKNENQQKVEHLERQIKHDMHKIICGHSLSDKGQQKRRRTWCPTASGSHLEL 407

  Fly   546 VESQT------QSPKPSRKPAPA--------------PRSIHL--------------EQRQRREL 576
            .|:.|      |.||.|..|.|.              |::|::              |:....|.
  Fly   408 AETGTTEDRIDQFPKVSHLPKPVFFHTSNAGKRWDNIPKTINILGSLDIGTESNSISEEFLPAEC 472

  Fly   577 IQ----RRKQLK-----RELAELP--PSAGIEGLELKLGEQPLAPSASPRL-------QLQALQN 623
            |.    |...||     |:|.:||  |...:...::|...|.|....|...       ::|.|:.
  Fly   473 IDFGSPRPDVLKPMLTIRQLPDLPLTPKGPLTTDKIKKEIQDLQMFTSLEKHFEVECEEVQGLKE 537

  Fly   624 RVCRLEAQRNATRVMEENQQAKLKQSIEIKQDQLKKLRAMLKQKPNNAC------LKEELQLVCE 682
            ::..:.|||:.   :|:...|: |:..:..:.::..|||     .|.|.      |:|:|..:.:
  Fly   538 KLAEVTAQRDN---LEQESLAE-KERYDALEKEVTSLRA-----DNEAANSKISELEEKLSTLKQ 593

  Fly   683 S---LESDRKTFEDLEFQYFEEESEHHASHEEFKRQEQRLMLEAELAALRIQIGPDEEEPGSPTS 744
            :   :|.:.:....|||::            |..::..:|.::..|:||.       |:..:..|
  Fly   594 TMRIMEVENQVAVGLEFEF------------EAHKKSSKLRVDDLLSALL-------EKESTIES 639

  Fly   745 PGSTGSNLVNGVMSQSLFGSAELLCPKRRNQEDLMSKSVNENMFYNHKIEANTSTPKRLPLQLFE 809
            ...:..||...|:..|..|....:.|:   |||:...|:........|:.|:..:.|        
  Fly   640 LQKSLDNLTRDVLRNSKEGHMLSIAPE---QEDIAGDSICNKCEELEKLIADLESKK-------- 693

  Fly   810 DLAGGSCEQISFNLSLQGDRFEVNPLERR--------VPSQDDIDRSCKVANDAPISASQGASTK 866
                .|||.....|.:...|.::..:|..        :....|.:|..|     .:|.||.|..:
  Fly   694 ----NSCECDQLRLEIVSVRDKLESVESAFNLASSEIIQKATDCERLSK-----ELSTSQNAFGQ 749

  Fly   867 IFDSIMEIERNRKLLLAQQGHQVIEHERQKMYDLKKKSHDEARTQYLLSTQQSMEQQRQLESDAN 931
            :.:....:::..:   |||......||:          |:..:.:|    |:..|:..||||.|.
  Fly   750 LQERYDALDQQWQ---AQQAGITTLHEK----------HEHVQEKY----QKLQEEYEQLESRAR 797

  Fly   932 GGKDAKLFEK---------TELQKLNQKPGEPVDDQVQKIAGDKENNVQNRKST 976
            ....|: |::         .::..||::..|         |.:....|||.:||
  Fly   798 SASSAE-FQRLQNDNTKFQADIASLNERLEE---------AQNMLTEVQNSEST 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5004NP_573195.1 FHA 41..104 CDD:278899
PH-like 1142..1242 CDD:302622
PH 1143..1237 CDD:278594
cmetNP_524993.3 KISc 8..328 CDD:214526 59/309 (19%)
Motor_domain 8..321 CDD:277568 56/291 (19%)
Smc <680..1449 CDD:224117 41/206 (20%)
TMPIT 779..>867 CDD:285135 19/77 (25%)
Smc 1042..1910 CDD:224117
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437960
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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