Protein Alignment CG5004 and ncd

DIOPT Version :10

• Sequence 1: NP_573195.1
• Gene: CG5004 / 32698
• FlyBaseID: FBgn0260748
• Length: 1247
• Species: Drosophila melanogaster
• Sequence 2: NP_476651.1
• Gene: ncd / 43517
• FlyBaseID: FBgn0002924
• Length: 700
• Species: Drosophila melanogaster
• Alignment Length: 828
• Identity: 171/828 - (20%)
• Similarity: 288/828 - (34%)
• Gaps: 223/828 - (26%)

  Fly   338 QNRIKTNGSLPRDKNKSPFPQQAGVASSANISLLSSSSGYENVRLLGPNRVEINGQIHVPASAGD 402
            |..|||  .||.|:.::.....|..|.:.|::...:..|    .||.|...::|....|....|.
  Fly    15 QMPIKT--VLPTDRIRAGLGGGAAGAGAFNVNANQTYCG----NLLPPLSRDLNNLPQVLERRGG 73

  Fly   403 GGSSSGVSSNALAPTAAVRASHENLNQNHSATTGGKYVPQSPRTKIRTNCMSPKKDVSFGNAFAL 467
            |..::......|...|.:|.|....:.|.  ..|.|....:|...     ..|.|....|.  ||
  Fly    74 GARAASPEPMKLGHRAKLRRSRSACDINE--LRGNKRTAAAPSLP-----SIPSKVSRLGG--AL 129

  Fly   468 AISPP----PLASSAVVSTSKPIPIPSMVKPPLAPKPPAPNQQRDYEQLFKSFERKQQQLDRMVP 528
            .:|..    |.|.|::.:|       ::.:||:.  .|||                     |...
  Fly   130 TVSSQRLVRPAAPSSITAT-------AVKRPPVT--RPAP---------------------RAAG 164

  Fly   529 AKRSNKNINNLTLNLQSVESQTQSPKPSRKPAPAPRSIHLEQRQRR--ELIQRRKQLKRELAELP 591
            ...:.|            .:.|.:...|...|.||:.|.....:.|  :|:::.|.||.:
  Fly   165 GAAAKK------------PAGTGAAASSGAAAAAPKRIAPYDFKARFHDLLEKHKVLKTK----- 212

  Fly   592 PSAGIEGLELKLGEQPLAPSASPRLQLQALQNRVCRLEAQRNATRVMEENQQAKLKQ---SIEIK 653
                .|.....:||....|.     ||:..||::...|:....|:...|..|.::||   .||..
  Fly   213 ----YEKQTEDMGELESMPQ-----QLEETQNKLIETESSLKNTQSDNECLQRQVKQHTAKIETI 268

  Fly   654 QDQLKKLRAMLKQKPNNACLKEELQLVCESLESDRKTFEDLEFQYFEEESEHHASHEEFKRQEQR 718
            ...|.:.:..|          .|||.:.|.::::.... ..|..:..:.:|     |..:..||:
  Fly   269 TSTLGRTKEEL----------SELQAIHEKVKTEHAAL-STEVVHLRQRTE-----ELLRCNEQQ 317

  Fly   719 LMLEAELAALRIQIGPDEEEPGSPTSPGSTGSNLVNGVMSQSLFGSAELLC---PKRRNQEDLMS 780
               .|||...:.|:.....|          ...|.|.||  .|.|:..:.|   |...::|:.|.
  Fly   318 ---AAELETCKEQLFQSNME----------RKELHNTVM--DLRGNIRVFCRIRPPLESEENRMC 367

  Fly   781 KS---VNENMFYNHKIEANTSTPKRLPLQLFEDLAGGSCEQISFNLSLQGDRFE-VNPLERRVPS 841
            .:   .:|:......|:|...:  ::..|:|      |.:|:...||.|.|.|| |:||   :.|
  Fly   368 CTWTYHDESTVELQSIDAQAKS--KMGQQIF------SFDQVFHPLSSQSDIFEMVSPL---IQS 421

  Fly   842 QDDIDRSCKVANDAPISASQGASTKIFDSIMEIERNRKLLL-AQQGHQVIEHERQKMYDLKK--- 902
            ..|....|..|.....|........:.:|:..|.|...||. :.:|::.:..|    |::|.
  Fly   422 ALDGYNICIFAYGQTGSGKTYTMDGVPESVGVIPRTVDLLFDSIRGYRNLGWE----YEIKATFL 482

  Fly   903 KSHDEARTQYLLSTQQSMEQQRQLESDANGGKDAKLFEKTELQKLNQKPGEPVDDQVQKIAGDKE 967
            :.::|.....|.:.|:.|| .|..:::.|....:.:.|:|.|        :|
  Fly   483 EIYNEVLYDLLSNEQKDME-IRMAKNNKNDIYVSNITEETVL--------DP------------- 525

  Fly   968 NNVQNRKSTGSSPTTTTTTTTGGGTTPQQQRHSQPELE---HHA----IALG----IGGGGSGGA 1021
            |::::...|......|.:|   .|.....:.|:..:||   .||    |::|    :...||...
  Fly   526 NHLRHLMHTAKMNRATAST---AGNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGSESP 587

  Fly  1022 GGANQMVARS--PRPLSEANN-------------------------------------------- 1040
            ..:.:|....  .|.|||..|
  Fly   588 KTSTRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQD 652

  Fly  1041 C-DATIEAPKFANGMDSSASPAVADNKRASSNSQDTASAGSGSGNSGS 1087
            | ..::::.:||..: :|.....|...|..:||  .|::.:.|.||||
  Fly   653 CFQESVKSLRFAASV-NSCKMTKAKRNRYLNNS--VANSSTQSNNSGS 697

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5004	NP_573195.1	FHA_PHLB1	1..122	CDD:438765
		SMC_N	<570..730	CDD:481474	35/164 (21%)
		Caldesmon	<664..801	CDD:460421	28/142 (20%)
		PH-like	1142..1242	CDD:473070
ncd	NP_476651.1	PRK03918	<204..350	CDD:235175	41/190 (22%)
		KISc_C_terminal	346..672	CDD:276817	70/366 (19%)