DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5004 and CG32318

DIOPT Version :10

Sequence 1:NP_573195.1 Gene:CG5004 / 32698 FlyBaseID:FBgn0260748 Length:1247 Species:Drosophila melanogaster
Sequence 2:NP_995952.1 Gene:CG32318 / 2768976 FlyBaseID:FBgn0052318 Length:164 Species:Drosophila melanogaster


Alignment Length:226 Identity:45/226 - (19%)
Similarity:75/226 - (33%) Gaps:75/226 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   846 AVPTVEFVWEKDEQLIKKNS---SKYS---------IVNTQIDYSTYESTLWIKNIVPDDYTKKV 898
            ::.||..|.|..:.|:||..   .|:|         ::..::.|..:   |.|.:...|:.:..:
  Fly   156 SLETVSLVNEDIKSLVKKQMFLWEKFSAPYMSETVYLIAARLRYKGF---LLILHKFKDEVSSLI 217

  Fly   899 KCIARNSFGTDHLSIPIIPPTHPDEPFNLTMT-----------NSTLNTISVAWEPRFDGGSDQI 952
            ...........|.|.|.:.....||... .||           .:.:.|....|        |:.
  Fly   218 PASDILLMWLTHQSYPTVYKDDVDEMLE-EMTRKVVQVGEKVEKTEVETTKELW--------DRY 273

  Fly   953 FEVKYRRQNDDLIHLVNTTHTNLRLSGLATANTYFFQIRSINARGFASSWTSPVIFATLNEDGVN 1017
            |...|.:...:|..:.|.       |||:. ||.|:             |  ||     ::..||
  Fly   274 FNQPYEKAGGELSIIANE-------SGLSN-NTMFY-------------W--PV-----SDMDVN 310

  Fly  1018 VA--MIRNEKLKLTTWIPYILIFIVLFMLLN 1046
            .|  .||          |..::.:.:|:.||
  Fly   311 TAYKSIR----------PRFVLELCIFLRLN 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5004NP_573195.1 FHA_PHLB1 1..122 CDD:438765
SMC_N <570..730 CDD:481474
Caldesmon <664..801 CDD:460421
PH-like 1142..1242 CDD:473070
CG32318NP_995952.1 Motor_domain 17..>106 CDD:473979
GINS_B_Psf1 115..163 CDD:412032 2/6 (33%)
Blue background indicates that the domain is not in the aligned region.

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