DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5004 and phldb3

DIOPT Version :10

Sequence 1:NP_573195.1 Gene:CG5004 / 32698 FlyBaseID:FBgn0260748 Length:1247 Species:Drosophila melanogaster
Sequence 2:XP_002939188.2 Gene:phldb3 / 100491291 XenbaseID:XB-GENE-6045638 Length:633 Species:Xenopus tropicalis


Alignment Length:837 Identity:186/837 - (22%)
Similarity:318/837 - (37%) Gaps:293/837 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   486 IPIP----SMVKPPLAP----------KPPAPNQQRDY-----EQLFKSFERKQQQLDRMVPAKR 531
            :|:|    :....|::|          :|||...:||.     .::..|.:.::......|||::
 Frog    15 LPVPREPANQKTKPMSPERKSEEECRCEPPAEEVERDSVSSEGGRVTDSTDEEESSSTESVPAQQ 79

  Fly   532 SNKNINNLTLNLQSVESQTQSPKPSRKPAPAPRSIHLEQRQRRELIQRRK---QLKRELAELPPS 593
            .           ::|.::.|....:::.........|||..|...:|||:   :::.|:|.|...
 Frog    80 E-----------KAVGNEVQRCLEAKQLKVMAHISKLEQSLRELQLQRRELNIEVEMEVALLEGE 133

  Fly   594 AGIEGLELKLGEQPLAPSASPRLQLQALQNRVCRLEAQRNATRVMEENQQAK-LKQSIEIKQDQL 657
            ...|..|:: .|:.|..|...:|:   ...|..:.|..::..::.:|.::.| |:|.|...:.||
 Frog   134 LRTEKKEME-KEENLIRSLHEKLR---ETERKWQEEKDKDKLKLRDEKKKIKDLEQKISEGKSQL 194

  Fly   658 KKLRAMLKQKPNNACLKEELQLVCESLESDRKTFEDLEFQYFEEES----EHHASHEEF------ 712
            :|....|:::     |::.:|.:.|::|:..|:|||||||..|.||    |..:|:.:.      
 Frog   195 EKQPESLREQ-----LRKNIQEMTETMEAAVKSFEDLEFQQLESESSRDEERESSYRQISQDISK 254

  Fly   713 ------KRQEQRLMLEAELAALRIQIGPDEEEPGSPTSPGSTGSNLVNGVMSQSLFGSAELLCPK 771
                  :|:::.|.||..:.....|...:.:.....           |..:.|||        .|
 Frog   255 RQNELNRRKDKVLRLEEHIQGAEDQAQVERQRLSEE-----------NTRVFQSL--------NK 300

  Fly   772 RRNQEDLMSKSVNENMFYNHKIEANT--------STPKR-----------LPLQLFEDLAGGSCE 817
            .::|.:.::....::...|.|.:::|        |.|||           .||.|.    |.:|.
 Frog   301 EKDQLESLNALSGKDQGQNEKPQSSTRKALQRTNSLPKRRASAPFVRPTDRPLSLH----GNTCL 361

  Fly   818 Q---ISFNLSLQGDR------FEVNP----LERRVPSQDDIDRSC--KVAND-APISASQGASTK 866
            :   ::.:|::..:.      ..::|    .:.|:|..||...|.  |:.:| :.:..|.|...|
 Frog   362 ESAGLALHLAVSSNNTGGQIALAISPNLQITQARLPQVDDRKGSNREKIPSDISTLQLSYGPLPK 426

  Fly   867 IFDSIMEIERNRKLLLAQQGHQVIEHERQKMYDLKKKSHDEARTQYLLSTQQSMEQQRQLESDAN 931
                |.||||..:..||         |::::.    |:.:|.|.        :.|..|:|||   
 Frog   427 ----IAEIERQLREALA---------EKERLL----KAREEKRA--------AKEMTRRLES--- 463

  Fly   932 GGKDAKLFEKTELQKLNQKPGEPVDDQVQKIAGDKENNVQNRKSTGSSPTTTTTTTTGGGTTPQQ 996
                                                                             
 Frog   464 ----------------------------------------------------------------- 463

  Fly   997 QRHSQPELEHHAIALGIGGGGSGGAGGANQMVARSPRPLSEANNCDATIEAPKFANGMDSSASPA 1061
               ||                       ||:....|.|:                     :|.||
 Frog   464 ---SQ-----------------------NQVKTEEPAPV---------------------TAKPA 481

  Fly  1062 VADNKRASSNSQDTASAGSGSGNSGSGGSTASDRKRVLPKHQRPLTRYLPIFSPDLNLRHHIETA 1126
            :.:.|                          .:.::||...:.|        :| |:||.|:|.:
 Frog   482 LPETK--------------------------GEPEKVLSVLRAP--------AP-LDLRSHLEAS 511

  Fly  1127 GHQIDPCPHVFVDAHSCRGYLHKLGATFHAWSRRWFVLDRQRSALIYYSDKSERKPRGGAYFATI 1191
            ||.::.||||.|....|:|||.|:|.....|.:||||.|||:..|.||:||.|.|.:|..||..|
 Frog   512 GHCVETCPHVRVSPTCCKGYLVKMGGRIKTWRKRWFVFDRQKRRLAYYTDKDEVKLKGVIYFQAI 576

  Fly  1192 DEVYLDHL-NASKSGRPHCTFIVKTKKRSYNLQAASDSAARIWIDAIITGAQGNLDY 1247
            :|||.||| :|.||..|..||.:||.:|.:.:.|.:..|.|||:|.::|.|:.|..|
 Frog   577 EEVYYDHLRSAFKSPHPKLTFCLKTFERLFCMVAPTPEAMRIWMDVMVTAAEENSRY 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5004NP_573195.1 FHA_PHLB1 1..122 CDD:438765
SMC_N <570..730 CDD:481474 46/179 (26%)
Caldesmon <664..801 CDD:460421 33/160 (21%)
PH-like 1142..1242 CDD:473070 47/100 (47%)
phldb3XP_002939188.2 Smc <77..>332 CDD:440809 61/293 (21%)
PH-like 528..628 CDD:473070 47/99 (47%)
Blue background indicates that the domain is not in the aligned region.

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