DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arpc3B and arpc3

DIOPT Version :10

Sequence 1:NP_573193.1 Gene:Arpc3B / 32696 FlyBaseID:FBgn0065032 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_001002114.1 Gene:arpc3 / 415204 ZFINID:ZDB-GENE-040625-107 Length:178 Species:Danio rerio


Alignment Length:177 Identity:103/177 - (58%)
Similarity:134/177 - (75%) Gaps:4/177 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPAFHSEIEDFQAS-VGNMALLPLRTQVRGPAPTVDIPNDIIDESLYFWKSNIFFRTYEVKSEVD 64
            |||:||.:.|.... |||||||||:||.:|||.......|||||::|::|:|:||:.||:|:|.|
Zfish     1 MPAYHSALMDADTKLVGNMALLPLKTQFKGPAARETKDTDIIDEAIYYFKANVFFKNYEIKNEAD 65

  Fly    65 RVLIYITLYITECLKRLARCTSKSQGQQELYTLAISRFDIPGDAGFPLNGIYTKP---EDPELMR 126
            |.||||||||:||||:|.:|:|:.||::|:|||.|:.|.|||:.|||||.:|.||   ::.|.||
Zfish    66 RTLIYITLYISECLKKLQKCSSRGQGEKEMYTLGITNFPIPGEPGFPLNAMYAKPSSKQEEENMR 130

  Fly   127 QYFLQLRQETGNRLLEKVFDTPDGKPSKWWICFAKKKFMEKSLSGPG 173
            .|..|:|||||.||.::|||....||||||:||.||:||.||||.||
Zfish   131 AYLQQIRQETGLRLCDRVFDPQTDKPSKWWVCFVKKQFMNKSLSAPG 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arpc3BNP_573193.1 P21-Arc 1..169 CDD:461152 98/171 (57%)
arpc3NP_001002114.1 P21-Arc 1..173 CDD:461152 98/171 (57%)

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