DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4991 and AVT4

DIOPT Version :9

Sequence 1:NP_001259638.1 Gene:CG4991 / 32695 FlyBaseID:FBgn0030817 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_014298.1 Gene:AVT4 / 855622 SGDID:S000005045 Length:713 Species:Saccharomyces cerevisiae


Alignment Length:548 Identity:126/548 - (22%)
Similarity:226/548 - (41%) Gaps:118/548 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RTQQQQSDQKAIEAAGEMGRTLEITGRQNDKSLEKNP------------------ERF------- 60
            |.:.|.:|..:.:.......::..:...:::.::|.|                  |.|       
Yeast   201 RQEHQLNDSASSDFTSHESDSINQSSPSSNQDIDKVPFLTRNFLEFLYVFGHFAGESFEDDFIPD 265

  Fly    61 TKNVTEKGADPENGDPVRRRGH---------ETSELEAATHLFKGSVGAGLFAMGDCFKNGGLAG 116
            :.|:..:|.| |....:.|..|         .||..:....|.|..:|.|:..:.:.|.||||..
Yeast   266 SSNMMIRGED-ERSALLSRPDHMKVLPSAKGTTSTKKVFLILLKSFIGTGVLFLPNAFHNGGLFF 329

  Fly   117 ATILLPIIAVMCVHCERMLIRGSVLAVERTPGVDFLDYPETVEKCFEHGPRPLRKMSRVMKLIVE 181
            :..:|....:....|..:|::     .:.:.||.            ..|...|:.....|::|:.
Yeast   330 SVSMLAFFGIYSYWCYYILVQ-----AKSSCGVS------------SFGDIGLKLYGPWMRIIIL 377

  Fly   182 MFLCVTQFGFCAIYFVFITENLHQVLQQ--NGIVISMSMVMLITLLPAMIPSLMTNLKYISPVSL 244
            ..|.:||.||...|.:|..:||...|..  :..|:.:|.:|:...:..:..|.:.|:..:|..||
Yeast   378 FSLVITQVGFSGAYMIFTAKNLQAFLDNVFHVGVLPLSYLMVFQTIIFIPLSFIRNISKLSLPSL 442

  Fly   245 FANVALLFGLIATLTIAFSDGPM-------PSVG-------DRHLFTGGAQLALFFGTALFSYEG 295
            .||..::.||:  :.|.|:...:       |::|       ||        ..||.|||:|::||
Yeast   443 LANFFIMAGLV--IVIIFTAKRLFFDLMGTPAMGVVYGLNADR--------WTLFIGTAIFAFEG 497

  Fly   296 IALILPLRNSMRRPEKFSTRFGVLNSTMFFTTALFIFTGFVSYVRWGEEVAGSITLNLVVEEVFS 360
            |.||:|:::|||.||||..   ||...:...|.|||....:.|:.:|..|...|.|||....:|.
Yeast   498 IGLIIPVQDSMRNPEKFPL---VLALVILTATILFISIATLGYLAYGSNVQTVILLNLPQSNIFV 559

  Fly   361 QVVKVIAALGVFLGYPIQFFVMIKILWPPLKRSNNCTQKY--------PITSQV----------- 406
            .::::..::.:.|..|:|.|..|||:      .|....|:        .:|::|           
Yeast   560 NLIQLFYSIAIMLSTPLQLFPAIKII------ENKFFPKFTKIYVKHDDLTTRVELRPNSGKLNW 618

  Fly   407 -------CLRFFMVMMTFGVALV-VPKLNLFISLIGALCSTCLAFVIPVLIDFVTRAQVPKALGV 463
                   .:|..:|::...:|.. ...|:.|:|:||:|....|.::.|.:: .:....:|:..|.
Yeast   619 KIKWLKNFIRSIIVIIVVSIAYFGSDNLDKFVSVIGSLACIPLVYIYPSML-HLRGNSLPETKGE 682

  Fly   464 WSYIKNILILTVAVLGIVT---GTYQSI 488
            :...|.:|...:...||.:   .:||||
Yeast   683 FWRFKPMLDTILIFFGIASMLYTSYQSI 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4991NP_001259638.1 SLC5-6-like_sbd 82..489 CDD:294310 114/462 (25%)
SdaC 84..488 CDD:223884 111/449 (25%)
AVT4NP_014298.1 Aa_trans 295..711 CDD:279788 113/453 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 151 1.000 Domainoid score I928
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 153 1.000 Inparanoid score I1099
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 1 1.000 - - mtm9188
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X121
TreeFam 00.000 Not matched by this tool.
76.960

Return to query results.
Submit another query.