DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4991 and LAX2

DIOPT Version :9

Sequence 1:NP_001259638.1 Gene:CG4991 / 32695 FlyBaseID:FBgn0030817 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_179701.1 Gene:LAX2 / 816640 AraportID:AT2G21050 Length:483 Species:Arabidopsis thaliana


Alignment Length:352 Identity:76/352 - (21%)
Similarity:141/352 - (40%) Gaps:83/352 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 MFLCVTQFGFCAIYFVFITENLHQVLQQNGIVISMSMVMLITLLPAMIPSLMTNLKYISPVSLFA 246
            :|..|.|...||....:|.:||.   ::....|..:.......:|:                 |.
plant   141 LFGSVIQLIACASNIYYINDNLD---KRTWTYIFGACCATTVFIPS-----------------FH 185

  Fly   247 NVAL--LFGLIAT------LTIA-FSDGPMPSVGDRHLFTGGAQLALFFGTA---LFSYEGIALI 299
            |..:  ..||:.|      |||| ...|.:..|  :|  :|.::|.|:|..|   |:::.|.|:.
plant   186 NYRIWSFLGLLMTTYTAWYLTIASILHGQVEGV--KH--SGPSKLVLYFTGATNILYTFGGHAVT 246

  Fly   300 LPLRNSMRRPEKFSTRFGVLNSTMFFTTALFIFT---GFVSYVRWGEEVAGSITLN------LVV 355
            :.:.::|.:|:||       .|...|.| |::.|   ...|.|.|   ..|.:.||      |:.
plant   247 VEIMHAMWKPQKF-------KSIYLFAT-LYVLTLTLPSASAVYW---AFGDLLLNHSNAFALLP 300

  Fly   356 EEVFSQVVKVIAALGVFLGY-----PIQFFVMIKILWPPLKRSNNCTQKYPITSQVCLRFFMVMM 415
            :.::.....|:..:..|:.:     |:.|      :|..|...:.|..   :..:...|..:|:.
plant   301 KNLYRDFAVVLMLIHQFITFGFACTPLYF------VWEKLIGMHECRS---MCKRAAARLPVVIP 356

  Fly   416 TFGVALVVPKLNLFISLIGALCSTCLAFVIPVLID-FVTRA---------QVPKALGVWS---YI 467
            .:.:|::.|......|.:|:|..:...::||.|.. |..|:         |.|:.||.|:   .|
plant   357 IWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFRSSAARENAVEQPPRFLGRWTGAFTI 421

  Fly   468 KNILILTVAVLGIVTGTYQSIVEIVKE 494
            ...:::.|.::|...|.:.|::..|.:
plant   422 NAFIVVWVFIVGFGFGGWASMINFVHQ 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4991NP_001259638.1 SLC5-6-like_sbd 82..489 CDD:294310 75/345 (22%)
SdaC 84..488 CDD:223884 74/344 (22%)
LAX2NP_179701.1 PLN03074 2..461 CDD:215559 76/352 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.