DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4991 and slc38a6

DIOPT Version :9

Sequence 1:NP_001259638.1 Gene:CG4991 / 32695 FlyBaseID:FBgn0030817 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001008117.2 Gene:slc38a6 / 493479 XenbaseID:XB-GENE-1016511 Length:448 Species:Xenopus tropicalis


Alignment Length:458 Identity:98/458 - (21%)
Similarity:167/458 - (36%) Gaps:102/458 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 PVRRRGHETSELEAATHLFKGSVGAGLFAMGDCFKNGGLAGATILLPIIAVMCVHCERMLIRGSV 140
            |.||....||...|..:|....:|:|:..:.......|:.|.:.||.|:|::..:...:|:|..:
 Frog    31 PQRRSSGGTSFGFAVFNLMNAIMGSGILGLSYAMAKTGILGFSALLLIVALLAAYSIHLLLRMCL 95

  Fly   141 LAVERTPGVDFLDYPETVEKCFEHGPRPLRKMSRVMKLIVEMFLCVTQFGFCAIYFVFITENLHQ 205
            |               |....:|  ...|....|..|::|...:.:...|..:.|...|...|..
 Frog    96 L---------------TAVTSYE--DLGLYAFGRSGKVLVACTILIQNVGAMSSYLFIIKSELPA 143

  Fly   206 VLQQ------------NG----IVISMSMVMLITLLPAMIPSLMTNLKYISPVSLFANVALLFGL 254
            .:..            :|    |:.|:.:|:.:.|||.     :..|.|.|.:|.|..|  .|.:
 Frog   144 AIASFLPGAQGEPWYLDGRTLLIITSVCIVLPLALLPK-----IGFLGYTSSLSFFFMV--YFAV 201

  Fly   255 IATL--------------TIAFSDGPMPSVGDRHLFTGGAQLALFFGTALFSYEGIALILPLRNS 305
            :..:              |:.|...|..|.....||....:.|....|..||:.....:||:...
 Frog   202 VIVIKKWNIPCPLPPLNHTVTFLQAPNISECKPKLFDFSKESAFALPTMAFSFLCHTSVLPIYCE 266

  Fly   306 MRRPEKFS----TRFGV-LNSTMFFTTALFIFTGFVSYVRWGEEVAGSITLNLVVEEVFSQVVKV 365
            ::.|.|..    ...|: |:..:::.:|||.:..|...|: .|.:.|  ....:.::|....|::
 Frog   267 LKSPSKSKMQNVANVGIALSFLIYYISALFGYLTFYDNVK-SELLQG--YSKYLPKDVLIITVRL 328

  Fly   366 IAALGVFLGYPIQFF-----VMIKILWPPLKRSNNCTQKYPITSQVCLRFFMVMMTFGV-----A 420
            ...|.|.|..|:..|     ||:...           .:||.:   .:|..:|.:...:     |
 Frog   329 CILLAVLLTVPLIHFPARKAVMMMFF-----------SRYPFS---YIRHILVTLVLNIIIVLLA 379

  Fly   421 LVVPKLNLFISLIGALCSTCLAFVIPVLIDFVTR-----AQVPKALGVWSYIKNILILTVAVLGI 480
            :.||.:.....::|:..||||.||.|.|  |..:     ...|:..|....:         ||||
 Frog   380 IYVPDMRSVFGVVGSTTSTCLLFVFPGL--FYVKLGREDCSSPQKFGACGLL---------VLGI 433

  Fly   481 VTG 483
            ..|
 Frog   434 CIG 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4991NP_001259638.1 SLC5-6-like_sbd 82..489 CDD:294310 95/452 (21%)
SdaC 84..488 CDD:223884 95/450 (21%)
slc38a6NP_001008117.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36 3/4 (75%)
SLC5-6-like_sbd 37..412 CDD:382020 88/417 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 1 1.010 - - D697331at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

Return to query results.
Submit another query.