DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4991 and polyph

DIOPT Version :9

Sequence 1:NP_001259638.1 Gene:CG4991 / 32695 FlyBaseID:FBgn0030817 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_610631.1 Gene:polyph / 36161 FlyBaseID:FBgn0033572 Length:460 Species:Drosophila melanogaster


Alignment Length:468 Identity:123/468 - (26%)
Similarity:210/468 - (44%) Gaps:44/468 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 QNDKSLEKNPERFTKNVTEKGADPENGDPVRRRGHET--SELEAATHLFKGSVGAGLFAMGDCFK 110
            ::|..|:..|....:::|..    ...:|..:|..|.  :..:|...|.|..:|.|:.||...|:
  Fly    12 RDDPDLQTEPLTIAQSITSF----YMYNPYEKRSVEVPLTNCDAFISLLKCVIGTGILAMPLAFR 72

  Fly   111 NGGLAGAT---ILLPIIAVMCVH---------CERMLIRGSVLAVERTPGVDFLDYPETVEKCFE 163
            ..|....|   |||.|:....:|         |.|          .|.|.|..   ||.|...:|
  Fly    73 CSGFVMGTVMSILLMILLTYSIHLLIADMTECCRR----------RRVPQVSM---PEAVRIAYE 124

  Fly   164 HGPRPLRKMSRVMKLIVEMFLCVTQFGFCAIYFVFITENL-----HQVLQQNGIVISMSMVMLIT 223
            .||:.:....|....:....|...||..|.:|.||:::|.     |.:.:.|...  ..:|..:.
  Fly   125 EGPKWINCFGRAAGFMTTCVLVFGQFLLCTVYLVFVSKNFKEIGDHYIERYNERY--YVLVACLL 187

  Fly   224 LLPAMIPSLMTNLKYISPVSLFANVALLFGLIATLTIAFSDGPMPSVGDRHLFTGGAQLALFFGT 288
            |||..   ::..|||:.|::|.:|..|..|....:...|:.  :|::.||.:.|...:...|...
  Fly   188 LLPLF---MIRRLKYLVPLNLISNFLLYAGFALIMYYLFNG--LPNINDREMVTPPVEWIEFIAI 247

  Fly   289 ALFSYEGIALILPLRNSMRRPEKFSTRFGVLNSTMFFTTALFIFTGFVSYVRWGEEVAGSITLNL 353
            |.||...:..:|.:...|..|:.:...|||||..:.|.....:|.|.:.|.|:|:.|..|||||:
  Fly   248 AAFSLTAVGSMLVVEAHMAHPQSYLGLFGVLNLAVLFILLSNMFFGIIGYWRFGDNVHASITLNI 312

  Fly   354 VVEEVFSQVVKVIAALGVFLGYPIQFFVMIKILWPPLKRSNNCTQKYPITSQVCLRFFMVMMTFG 418
            ..:|:.||.:||..|.|:||.||:..||:|.:::...:.|.. ..:|....:..:|...:.:|..
  Fly   313 PQDEILSQFIKVFIASGIFLSYPLNGFVVITVMFSDYENSEP-RGRYRTLIEYVVRLLFLFLTGA 376

  Fly   419 VALVVPKLNLFISLIGALCSTCLAFVIPVLIDFVTRAQVPKALGVWSYIKNILILTVAVLGIVTG 483
            ||:.||.|.....|.||...:.|..:.|.|||......|.....:|..|::||::.:.::..:.|
  Fly   377 VAIGVPNLAALTELEGAFSLSNLNLLCPALIDVFLNYNVGYGRLMWKLIRDILLILIGLIFGIVG 441

  Fly   484 TYQSIVEIVKEFK 496
            ...::::::::|:
  Fly   442 CTVALMQLIRDFQ 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4991NP_001259638.1 SLC5-6-like_sbd 82..489 CDD:294310 116/425 (27%)
SdaC 84..488 CDD:223884 115/422 (27%)
polyphNP_610631.1 SLC5-6-like_sbd 50..407 CDD:320982 106/377 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468299
Domainoid 1 1.000 157 1.000 Domainoid score I1306
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 161 1.000 Inparanoid score I1622
Isobase 1 0.950 - 0 Normalized mean entropy S4217
OMA 1 1.010 - - QHG54358
OrthoDB 1 1.010 - - D284074at33208
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 1 1.000 - - mtm1178
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X121
1110.960

Return to query results.
Submit another query.