DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4991 and Slc38a8

DIOPT Version :9

Sequence 1:NP_001259638.1 Gene:CG4991 / 32695 FlyBaseID:FBgn0030817 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001009950.1 Gene:Slc38a8 / 234788 MGIID:2685433 Length:432 Species:Mus musculus


Alignment Length:486 Identity:102/486 - (20%)
Similarity:180/486 - (37%) Gaps:144/486 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 GDPVRRRGHETSELEAATH-----------LFKGSVGAGLFAMGDCF-KNGGLAGATILLPIIAV 126
            |.|...||.....|.||||           |.|.::||||......| |.||:. .|.|:.::::
Mouse     3 GQPRGSRGPLEKPLPAATHPTLSSLGAVFILLKSALGAGLLNFPWAFYKAGGML-PTFLVALVSL 66

  Fly   127 MCVHCERMLIRGSVLAVERTPGVDFLDYPETVEKCFEHGPRPLRKMSRVMKLIVEMFLCVTQFG- 190
            :      .||.|.|:          |.|..:|.     |....:.:.|.        ||....| 
Mouse    67 V------FLISGLVI----------LGYAASVS-----GQTTYQGVVRE--------LCGPAMGK 102

  Fly   191 FCAIYFVFITENLHQVLQQNGIVISMSMVMLI-----TLLPAMIPSL-------------MTNLK 237
            .|.|.|:           .|.::||::.:.:|     .|..:::|..             :.::.
Mouse   103 LCEICFL-----------TNLLMISVAFLRVIGDQLEKLCDSLLPDAPQPWYAAQNFTLPLISML 156

  Fly   238 YISPVSLFANVAL-----LFGLIATLTIAF---------------SDGPMPSVGDRHLFTGGAQL 282
            .|.|:|....:||     :.|.:|...:|.               ..||        |.:.....
Mouse   157 VIFPLSALREIALQKYTSILGTLAACYLALVITVQYYLWPQGLIRQPGP--------LLSPSPWT 213

  Fly   283 ALF--FGTALFSYE----GIALILPLRNSMRRPEKFSTRFGVLNSTMFFTTALFIF--TGFVSYV 339
            ::|  |.|..|.::    .:::...:.|.       |.....|.|.:.......::  ||...::
Mouse   214 SVFSVFPTICFGFQCHEAAVSIYCSMWNQ-------SLSHWTLVSVLSLLACCLVYTLTGVYGFL 271

  Fly   340 RWGEEVAGSITLNLVVEEVFSQVVKVIAALGVFLGYPIQFFVMIKILWPPLKRSNNCTQKYPITS 404
            .:|.||:..|.::....:....|.:|:.|:.:...|||..|:...::....|:|...|:..|:.:
Mouse   272 TFGPEVSADILMSYPGNDTAIIVARVLFAVSIVTVYPIVLFLGRSVMQDFWKKSYWATRGPPVLA 336

  Fly   405 -------QVCLRFFMVMMTFGVALVVPKLNLFISLIGALCSTCLAFVIPVL-----IDFVTRAQV 457
                   ::.|.|..|::|..:||.:|.|:..||:||.: |:...|:.|.|     :|  |....
Mouse   337 DPSGPWVRLPLTFLWVVVTLTMALFLPDLSEIISIIGGV-SSFFIFIFPGLCLICAVD--TEPMG 398

  Fly   458 PK---ALGVWSYIKNILILTVAVLGIVTGTY 485
            |:   .|..|           .:|.::.||:
Mouse   399 PRVKCCLEAW-----------GILSVLVGTF 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4991NP_001259638.1 SLC5-6-like_sbd 82..489 CDD:294310 98/478 (21%)
SdaC 84..488 CDD:223884 98/476 (21%)
Slc38a8NP_001009950.1 SdaC 23..429 CDD:223884 93/466 (20%)
SLC5-6-like_sbd 23..421 CDD:294310 93/466 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848939
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 1 1.010 - - D697331at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.860

Return to query results.
Submit another query.