DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4991 and skat-1

DIOPT Version :9

Sequence 1:NP_001259638.1 Gene:CG4991 / 32695 FlyBaseID:FBgn0030817 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_498989.1 Gene:skat-1 / 176271 WormBaseID:WBGene00010307 Length:460 Species:Caenorhabditis elegans


Alignment Length:485 Identity:121/485 - (24%)
Similarity:212/485 - (43%) Gaps:72/485 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 SLEKNPERFTKNVTEKGADPENGD------PVRRRGHETSELEAATHLFKGSVGAGLFAMGDCFK 110
            |.|:..||   .||.:|......|      |..|.|...:...|...|.|....||.|::...:|
 Worm     2 SEEEGRER---AVTVEGDAESMNDGRALVQPPARSGDVITPTRAVLTLSKSMFNAGCFSLPYAWK 63

  Fly   111 NGGLAGATILLPIIAVMCVHCERMLIRGSVLAVERTPGVDFLDYPETVEKCFEHGP-RPLRKMSR 174
            .|||..:.::..:||.:..:...:|:|.|....:::.. ..|||....:|..::.. |.||..|:
 Worm    64 LGGLWVSFVMSFVIAGLNWYGNHILVRASQHLAKKSDR-SALDYGHFAKKVCDYSDIRFLRNNSK 127

  Fly   175 VMKLIVEMFLCVTQFGFCAIYFVFITENL------------HQVLQQNGIVISMSMVMLITLLPA 227
            .:...|.:.:...|.|.|::..:||::||            ||         .|.::..::|...
 Worm   128 AVMYFVNVTILFYQLGMCSVAILFISDNLVNLVGDHLGGTRHQ---------QMILMATVSLFFI 183

  Fly   228 MIPSLMTNLKYISPVSLFANVALLFGLIATLTIAFSDGPMPSVGDR----HLFTGGAQLALFFGT 288
            ::.::.|.::.   ||.||.|:.:|.:|....|.......|:..|:    ..|||...:   .|.
 Worm   184 LLTNMFTEMRI---VSFFALVSSVFFVIGAAVIMQYTVQQPNQWDKLPAATNFTGTITM---IGM 242

  Fly   289 ALFSYEGIALILPLRNSMRRPEKFSTRFGVLNSTMFFTTALFIFTGFVSYVRWGEEVAGSITLNL 353
            :::::||..:|||:.|.:..|..|...||||::||...||.....||..|..:|:.:|.:||.|:
 Worm   243 SMYAFEGQTMILPIENKLDNPAAFLAPFGVLSTTMIICTAFMTALGFFGYTGFGDSIAPTITTNV 307

  Fly   354 VVEEVFSQVVKVIAALGVFLGYPIQFFVMIKILWPPLKRSNNCTQKYPIT----SQVCLRFFMVM 414
            ..|.::| .|.|...|...||..|..:|:..:.:...:|....  ::|..    |....|.|.|:
 Worm   308 PKEGLYS-TVNVFLMLQSLLGNSIAMYVVYDMFFNGFRRKFGA--RFPNVPKWLSDKGFRVFWVL 369

  Fly   415 MTFGVALVVPKLNLFISLIGALCSTCLAFVIPVLIDFVTRAQVPKALGVWSYIK----------- 468
            :|:.:|:::|||.:.|.|:|.......|.:.|...:.:|         .|:..|           
 Worm   370 VTYLMAVLIPKLEIMIPLVGVTSGALCALIFPPFFEMIT---------FWTDWKGLLTYRQRMTK 425

  Fly   469 ---NILILTVAVLGIVTGTYQSIVEIVKEF 495
               |::::.:.|..|:.|.|.:|..|::.|
 Worm   426 IFINLVVMAIGVFAIIAGVYTNIHAIIQSF 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4991NP_001259638.1 SLC5-6-like_sbd 82..489 CDD:294310 107/441 (24%)
SdaC 84..488 CDD:223884 107/438 (24%)
skat-1NP_498989.1 Aa_trans 35..446 CDD:279788 106/438 (24%)
SdaC 40..448 CDD:223884 107/435 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 1 1.010 - - D284074at33208
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X121
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.030

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