DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4991 and slc38a5a

DIOPT Version :9

Sequence 1:NP_001259638.1 Gene:CG4991 / 32695 FlyBaseID:FBgn0030817 Length:496 Species:Drosophila melanogaster
Sequence 2:XP_001344749.1 Gene:slc38a5a / 100005797 ZFINID:ZDB-GENE-081105-92 Length:491 Species:Danio rerio


Alignment Length:470 Identity:85/470 - (18%)
Similarity:168/470 - (35%) Gaps:119/470 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 HLFKGSVGAGLFAMGDCFKNGGLAGATILLPIIAVMCVHCERMLIRGS----VLAVER------- 145
            :|....:|:|:..:.....|.|:.....||..||::..:...:|:|.:    :.|.|:       
Zfish    65 NLSNAIMGSGILGLAYAMANTGIILFVFLLITIALLSSYSIHLLLRSAGVVGIRAYEQLGYRAFG 129

  Fly   146 TPGVDFLDYPETVEKCFEHGPRPLRKMSRVMKLIVEMFLCVTQFGFCAIYFVFITENLHQVLQ-- 208
            |||                            |::....:.:...|..:.|...:...|..|::  
Zfish   130 TPG----------------------------KVVAGCIITLHNIGAMSSYLFIVKIELPHVIEGL 166

  Fly   209 -----QNG--------IVISMSMVMLITLLPAMIPSLMTNLKYISPVSLFANVALLFGLIATL-- 258
                 .:|        ::|.:|:.::..|      :||..|.|:...|.|:...::|.||:.:  
Zfish   167 TGLPDNSGHWYVDGRYLIIIVSVCVIFPL------ALMKRLGYLGYTSGFSLSCMVFFLISVIYK 225

  Fly   259 ---------------TIAFSDGPMPS-------------VGDRHLFTGGAQLALFFGTALFSYEG 295
                           ...||:..|.|             :.:..|.|...|.|.......|::..
Zfish   226 CLSNSGIDSESNQNEKCTFSNASMISSTTEINEINSTTEICEAKLLTINPQTAFTIPIIAFAFVC 290

  Fly   296 IALILPLRNSMRRPEKFSTRFGVLNSTMFFTTALFIFTGFVSYVRWGEEVAGSITLNLVVEEVFS 360
            ...:||:...::.|.|...: .|.|.::.....:::.|....|:.:...|...:.......::..
Zfish   291 HPEVLPIYTELKNPSKKQMQ-KVANISILAMFVMYLLTAIFGYLTFFANVDSELLKMYNKNDILM 354

  Fly   361 QVVKVIAALGVFLGYPIQFF----VMIKILWP--PLKRSNNCTQKYPITSQVCLRFFMVMMTFGV 419
            ..|::...:.|.|..|:..|    .::::|:|  |.....:      |...:||.|.:.::    
Zfish   355 LCVRLAVLVAVTLTVPVVLFPIRRAVLQLLFPEKPFSWVRH------IIIAMCLLFAVNLL---- 409

  Fly   420 ALVVPKLNLFISLIGALCSTCLAFVIPVL--IDFVTRAQV-----PKALGV----WSYIKNILIL 473
            .:.||.:......|||..:..|.|::|.:  |..|...|.     ||.|.:    ..:|..|:.:
Zfish   410 VIFVPNIRDIFGFIGATSAPSLIFILPGIFYIYIVPEEQEPLKSRPKILAILFVTLGFIFMIMSI 474

  Fly   474 TVAVLGIVTGTYQSI 488
            |..::..|.|. ||:
Zfish   475 TFIIIEWVNGK-QSV 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4991NP_001259638.1 SLC5-6-like_sbd 82..489 CDD:294310 85/470 (18%)
SdaC 84..488 CDD:223884 84/468 (18%)
slc38a5aXP_001344749.1 SdaC 55..479 CDD:223884 81/458 (18%)
SLC5-6-like_sbd 55..479 CDD:294310 81/458 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594539
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.850

Return to query results.
Submit another query.