DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16700 and AT3G09340

DIOPT Version :9

Sequence 1:NP_573191.1 Gene:CG16700 / 32694 FlyBaseID:FBgn0030816 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_187545.2 Gene:AT3G09340 / 820090 AraportID:AT3G09340 Length:528 Species:Arabidopsis thaliana


Alignment Length:536 Identity:120/536 - (22%)
Similarity:219/536 - (40%) Gaps:124/536 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DAEAPNQLEKNQTA----------------TVPRQETAEGGSTGETAVGGAAAKVTK-------- 42
            |:.|...|.:|.:|                |.|.....:|.|| ||:...:.|.:.|        
plant    31 DSNASFSLSQNDSAFWPQSYRHSVDLLTGVTPPMVSFIQGRST-ETSFSSSIASLYKRRPTSIAN 94

  Fly    43 -------------EQDH-------------DAEYHPPT--SYLETIVHLFKGNIGPGLFAMGDAF 79
                         |:|.             |..|..|.  |:.:::::......|..|..|..|.
plant    95 SFVSSTSKQPLLSEKDDVSFLSSQVGLSNTDLSYGEPNFCSFPQSVLNGINVLCGISLLTMPYAV 159

  Fly    80 KNGGLLVAPLLTVVIAVVSIHCQHVLVTCSKKMRDLKGDSVCADYAQTVEQCFENGPSKLRGWSR 144
            |.||.|...:| :..|:::.:...:|..|.:...||:      .|....:..|        |:: 
plant   160 KEGGWLGLCIL-LSFAIITCYTGILLKRCLESSSDLR------TYPDIGQAAF--------GFT- 208

  Fly   145 TMGRLVDIFICVTQLGFCCI-YFVFISTNLKQILQAYDIDMNVHLVML-----------LAFVPV 197
              |||:...:...:|..||: |.:.:|.||.::..  :|.:|:..|.|           |..:|.
plant   209 --GRLIISILLYMELYVCCVEYIIMMSDNLSRVFP--NITLNIVGVSLDSPQIFAISATLIVLPT 269

  Fly   198 LLSSLITNLKWLTPVSMFANVCMILGLAITLYYALKDGLPEVEERALWTNGSQLAL--------F 254
            :....::.|.:|:...:|.::.    ||:.|::     :..|:.....|.|..|.|        .
plant   270 VWLKDLSLLSYLSAGGVFVSIL----LALCLFW-----VGSVDGVGFHTGGKALDLANLPVAIGI 325

  Fly   255 FGTAIFAFEGIALVMPLKNAMRKPHQFERPLGVLNVGMFLVSVMFMFAGSV-GYMKWGEQVGGSL 318
            ||   |.|.|.|::..:.::|::|.:|  || ||.:. |...|.|..|.:: ||..:||.:....
plant   326 FG---FGFSGHAVLPSIYSSMKEPSKF--PL-VLLIS-FGFCVFFYIAVAICGYSMFGEAIQSQF 383

  Fly   319 TLNLGDTILAQAVKLMVSAGV-LLGYPL---QFFVAIQIMWPNAKQMCGIEGRSLLGELGFRTFM 379
            |||:.....|..:.:..:..| :..|.|   ...:.::.:.|.:::|     ||....:..:|.:
plant   384 TLNMPQQYTASKIAVWTAVVVPMTKYALALTPIVLGLEELMPPSEKM-----RSYGVSIFIKTIL 443

  Fly   380 VLVTLAIAEMVPALGLFISLIGALCSTALALVFPPVIEL-ISRSELNKGPGIWICVKNLVILVLA 443
            ||.||.:|...|...:..:|:|:..:|.:..:||.:..| |.:..|:| ..|.|||   .|::..
plant   444 VLSTLVVALTFPFFAIMGALMGSFLATLVDFIFPCLCYLSILKGRLSK-TQIGICV---FIIISG 504

  Fly   444 LLGFFTGSYESLKQIV 459
            ::....|:|.::.::|
plant   505 IVSGCCGTYSAIGRLV 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16700NP_573191.1 SLC5-6-like_sbd 53..452 CDD:294310 100/426 (23%)
SdaC 57..452 CDD:223884 98/420 (23%)
AT3G09340NP_187545.2 SLC5-6-like_sbd 135..507 CDD:320982 98/416 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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