DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16700 and Slc38a3

DIOPT Version :9

Sequence 1:NP_573191.1 Gene:CG16700 / 32694 FlyBaseID:FBgn0030816 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001186146.1 Gene:Slc38a3 / 76257 MGIID:1923507 Length:505 Species:Mus musculus


Alignment Length:467 Identity:102/467 - (21%)
Similarity:180/467 - (38%) Gaps:86/467 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PN--QLEKNQTATVPRQETAEGGSTGETAVG-GAAAKVTKEQDHDAEYHPPTSYLETIVHLFKGN 67
            ||  .||......||..:|.....|.....| |...|...::.|..::...||:..::.:|....
Mouse    14 PNGKHLEGLLPVGVPTTDTQRTEDTQHCGEGKGFLQKSPSKEPHFTDFEGKTSFGMSVFNLSNAI 78

  Fly    68 IGPGLFAMGDAFKNGGLLVAPLLTVVIAVVSIHCQHVLVTCSKKMRDLKGDSVCA--DYAQTVEQ 130
            :|.|:..:..|..|.|:::...|...:|::|.:..|:|         ||...:..  .|.|...:
Mouse    79 MGSGILGLAYAMANTGIILFLFLLTAVALLSSYSIHLL---------LKSSGIVGIRAYEQLGYR 134

  Fly   131 CFENGPSKLRGWSRTMGRLVDIFICVTQLGFCCIYFVFISTNLKQILQAYDIDMNV--------- 186
            .| ..|.||         ...:.|.:..:|....|...|.:.|..::|.:   :|:         
Mouse   135 AF-GTPGKL---------AAALAITLQNIGAMSSYLYIIKSELPLVIQTF---LNLEKPASVWYM 186

  Fly   187 ---HLVMLLAFVPVLLSSLITNLKWLTPVSMFANVCMILGLAITLYYALKDGLP----------- 237
               :||:|::...:|..:|:..|.:|...|.|:..||:..|...:|...:...|           
Mouse   187 DGNYLVILVSVTIILPLALMRQLGYLGYSSGFSLSCMVFFLIAVIYKKFQVPCPLAHNLANATGN 251

  Fly   238 -----EVEERA-----------------LWTNGSQLALFFGTAIFAFEGIALVMPLKNAMRKPHQ 280
                 ..||:|                 .:|..||.|.......|||.....|:|:...::.|.:
Mouse   252 FSHMVVAEEKAQLQGEPDTAAEAFCTPSYFTLNSQTAYTIPIMAFAFVCHPEVLPIYTELKDPSK 316

  Fly   281 FERPLGVLNVGMFLVSVMFMFAGSVGYMKWGEQVGGSL--TLNLGD--TILAQAVKLMVSAGVLL 341
             .:...:.|:.:.::.||:..|...||:.:.:.|...|  |.:..|  .:|...|::.|...|.|
Mouse   317 -RKMQHISNLSIAVMYVMYFLAALFGYLTFYDGVESELLHTYSKVDPFDVLILCVRVAVLIAVTL 380

  Fly   342 GYPLQFFV---AIQIMWPNAKQMCGIEGRSLLGELGFRTFMVLVTLAIAEMVPALGLFISLIGAL 403
            ..|:..|.   |||.|....::...:  |.:|...|..|.:.|:.:....:   ||:| .:|||.
Mouse   381 TVPIVLFPVRRAIQQMLFQNQEFSWL--RHVLIATGLLTCINLLVIFAPNI---LGIF-GIIGAT 439

  Fly   404 CSTALALVFPPV 415
            .:..|..:||.:
Mouse   440 SAPCLIFIFPAI 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16700NP_573191.1 SLC5-6-like_sbd 53..452 CDD:294310 90/417 (22%)
SdaC 57..452 CDD:223884 88/413 (21%)
Slc38a3NP_001186146.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 27..48 6/20 (30%)
Aa_trans 63..492 CDD:279788 90/418 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848965
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 1 1.010 - - D697331at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.760

Return to query results.
Submit another query.