DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16700 and VGAT

DIOPT Version :9

Sequence 1:NP_573191.1 Gene:CG16700 / 32694 FlyBaseID:FBgn0030816 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster


Alignment Length:550 Identity:103/550 - (18%)
Similarity:186/550 - (33%) Gaps:130/550 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DAEAP-----NQLEKNQTATVPRQETA-EGGSTGETA--------------VGGAAAKVTKEQDH 46
            |.|.|     .|...:|.|.....|.. :||.|.|.:              .||.        |.
  Fly    35 DYEQPPGSTAQQHHHSQQAQHKAMEAGMDGGDTTEMSSNPFRNAGSWTNDGEGGG--------DG 91

  Fly    47 DAEYHPPTSYLETIVHLFKGNIGPGLFAMGDAFKNG----------------------------- 82
            |.||.  ..|..|..:.:.|.     :...|.|:.|                             
  Fly    92 DGEYR--NEYQSTSFNEYDGR-----YQQTDGFRQGSIASEGSSFVCEGEGGGGCKIDEFQAAWN 149

  Fly    83 ------GLLVAPL-----------LTVVIAVVSIHCQ--HVLVTCSKKMRDLKGDSVCA--DYAQ 126
                  |:.:..|           :..::.:..|.|.  .|||.|..:.....|..|..  .|..
  Fly   150 VTNAIQGMFIVSLPFAVLHGGYWAIVAMVGIAHICCYTGKVLVQCLYEPDPATGQMVRVRDSYVA 214

  Fly   127 TVEQCFENGPSKLRGWSRTMGRLVDIFICVTQLGFCCIYFVFISTNLKQILQAYDIDMNVHLVML 191
            ..:.||  || ||...:.::.:|:::.:.      |.:|.|.....|.........|....  ||
  Fly   215 IAKVCF--GP-KLGARAVSIAQLIELLMT------CILYVVVCGDLLAGTYPQGSFDSRSW--ML 268

  Fly   192 LAFVPVLLSSLITNLKWLTPVSMFANVCMILGLAITLYYALKD----GLPEVEERALWTNGSQLA 252
            ...:.:|....:.:||.::.:|.:..:..|:..|:.|.|.|..    |..:|.......|   ..
  Fly   269 FVGIFLLPMGFLKSLKMVSTLSFWCTMSHIVINAVILGYCLLQIGDWGWSKVRFSIDMEN---FP 330

  Fly   253 LFFGTAIFAFEGIALVMPLKNAMRKPHQFERPLGVLNVGMFLVSVMFMFAGSVGYMKWGEQVGGS 317
            :..|..:|::.....:..|:..|....:|...|...::...:....|   |.:.::.:.......
  Fly   331 ISLGVIVFSYTSQIFLPTLEGNMIDRSKFNWMLDWSHIAAAVFKAGF---GYICFLTFQNDTQQV 392

  Fly   318 LTLNLGDTILAQAVKLMVSAGVLLGYPLQFFVAIQIMW-------PNAK--QMCGIEGRSLLGEL 373
            :|.||........|...:....||.|||.::.|.:::.       |..|  .:..::|...:..|
  Fly   393 ITNNLHSQGFKGMVNFFLVIKALLSYPLPYYAACELLERNFFRGPPKTKFPTIWNLDGELKVWGL 457

  Fly   374 GFRTFMVLVTLAIAEMVPALGLFISLIGALCSTALALVFPPVI------ELISRSELNKGPGIWI 432
            |||..:::.|:.:|..:|...:.:..||:...|.|:.::|...      .|:.:.|:        
  Fly   458 GFRVGVIVSTILMAIFIPHFSILMGFIGSFTGTMLSFIWPCYFHIKIKGHLLDQKEI-------- 514

  Fly   433 CVKNLVILVLALLGFFTGSYESLKQIVKHF 462
             .|:.:|:.|.:|....|.|:|...::..|
  Fly   515 -AKDYLIIGLGVLFGVIGIYDSGNALINAF 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16700NP_573191.1 SLC5-6-like_sbd 53..452 CDD:294310 83/467 (18%)
SdaC 57..452 CDD:223884 82/463 (18%)
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:382020 77/414 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468279
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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