DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16700 and Slc36a4

DIOPT Version :9

Sequence 1:NP_573191.1 Gene:CG16700 / 32694 FlyBaseID:FBgn0030816 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001101597.1 Gene:Slc36a4 / 315439 RGDID:1311528 Length:500 Species:Rattus norvegicus


Alignment Length:500 Identity:158/500 - (31%)
Similarity:271/500 - (54%) Gaps:68/500 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDAEAP------NQLEKNQTATVPRQETAEGGSTGETAVGGAAAKVTKEQDHDAEYHPPTSYLET 59
            |:|.||      .:|:.:....:..::..:|.|..|..  .....:.|....|.::  ..|:::|
  Rat     1 MEAPAPAEAAGCEELDMDVMRPLINEQNFDGSSDEEQE--QTLLPMQKHYQLDGQH--GISFVQT 61

  Fly    60 IVHLFKGNIGPGLFAMGDAFKNGGLLVAPLLTVVIAVVSIHCQHVLVTCSKKM-RDLKGDSVCAD 123
            ::||.|||||.||..:..|.||.|:::.|:..|.|.::|:||.|:||.||..: :..|..::  .
  Rat    62 LMHLLKGNIGTGLLGLPLAIKNAGIVLGPISLVFIGIISVHCMHILVRCSHFLCQRFKKSTL--G 124

  Fly   124 YAQTVEQCFENGP----SKLRGWSRTMGRLVDIFICVTQLGFCCIYFVFISTNLK---------- 174
            |:.||....|..|    .:...|.|:   :||.|:.:||||||.:|.||::.|:|          
  Rat   125 YSDTVSFAMEASPWSCLQRQAAWGRS---VVDFFLVITQLGFCSVYIVFLAENVKQVHEGLLETT 186

  Fly   175 ----------QILQAYDIDMNVHLVMLLAFVPVL-LSSLITNLKWLTPVSMFANVCMILGLAITL 228
                      |:.:...:|:.|:   :|.|:|:| |...|..||.|..:|..||:.|...|.|..
  Rat   187 VVVSNSSDLSQVCERRSVDLRVY---MLCFLPLLILLVFIRELKSLFVLSFLANISMAASLVIIY 248

  Fly   229 YYALKDGLPEVEERALWTNGSQLALFFGTAIFAFEGIALVMPLKNAMRKPHQFERPLGVLNVGMF 293
            .|.:: .:|:.....:.....:..||||||:||||||.:|:||:|.||:..:|.:   .||:||.
  Rat   249 QYVVR-SMPDPHNLPIVAGWKKYPLFFGTAVFAFEGIGVVLPLENQMRESKRFPQ---ALNIGMA 309

  Fly   294 LVSVMFMFAGSVGYMKWGEQVGGSLTLNL-GDTILAQAVKLMVSAGVLLGYPLQFFVAIQIMWP- 356
            :|:|:::...::|||.:.:::.||:|||| .|..|.|:||::.|.|:.:.|.:||:|..:|:.| 
  Rat   310 IVTVLYISLATLGYMCFRDEIKGSITLNLPQDMWLYQSVKILYSFGIFVTYSIQFYVPAEIIIPA 374

  Fly   357 -----NAKQMCGIEGRSLLGELGFRTFMVLVTLAIAEMVPALGLFISLIGALCSTALALVFPPVI 416
                 :||..|       :.:.|.|:.:|.:|.|.|.::|.|.:.||.:||:.|:.|||:.||::
  Rat   375 VTARLHAKWKC-------ICDFGIRSLLVSITCAGAVLIPRLDIVISFVGAVSSSTLALILPPLV 432

  Fly   417 ELI--SRSELNKGPGIWICVKNLVILVLALLGFFTGSYESLKQIV 459
            |::  |:...|    :|:.:||:.|.....:||..|:|.::::|:
  Rat   433 EILTFSKDHYN----VWMVLKNISIAFTGFVGFLLGTYVTVEEII 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16700NP_573191.1 SLC5-6-like_sbd 53..452 CDD:294310 146/433 (34%)
SdaC 57..452 CDD:223884 145/429 (34%)
Slc36a4NP_001101597.1 SLC5-6-like_sbd 54..469 CDD:294310 147/439 (33%)
PotE <223..477 CDD:223605 92/265 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352575
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 1 1.010 - - D284074at33208
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 1 1.000 - - mtm8993
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22950
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X121
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.820

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