DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG16700 and slc-36.4

DIOPT Version :9

Sequence 1:NP_573191.1 Gene:CG16700 / 32694 FlyBaseID:FBgn0030816 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_492453.1 Gene:slc-36.4 / 186798 WormBaseID:WBGene00010421 Length:481 Species:Caenorhabditis elegans


Alignment Length:484 Identity:127/484 - (26%)
Similarity:230/484 - (47%) Gaps:70/484 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DAEAPNQLEKNQTATVPRQETAEGGSTGETAVGGAAAKVTKEQDHDAEYHPPTSYLETIVHLFKG 66
            |.:.||..:...:..:.|:       ||.:|..|                        :::...|
 Worm    42 DRDRPNDTKSVISTLIARK-------TGISATSG------------------------LINFICG 75

  Fly    67 NIGPGLFAMGDAFKNGGLLVAPLLTVVIAVVSIHCQHVLVTCSKKMRDLKGDSVCADYAQTVEQC 131
            .||||.|::..:||..||.....|..::..:|::..|.:|.||:.:....||. ..||.:..|..
 Worm    76 MIGPGCFSLAVSFKQAGLWGGLALVFIVGFLSLYSMHKIVNCSQYLAKSNGDQ-SLDYGEMAEAA 139

  Fly   132 FENGPSKLRGWSRTMGRLVDIFI--CVT--QLGFCCIYFVFISTNLKQILQAYDI------DMNV 186
            .:|...    |:|..|:|..|.|  |:.  |||...::.||.   ::.:::.::.      ..:.
 Worm   140 MQNSYK----WARKHGKLAKIVINACLLAFQLGVITVFMVFA---VEHVIEIWEFFADSPPPFSK 197

  Fly   187 HLVMLLAFVPVLLSSLITNLKWLTPVSMFANVCMILGLA-ITLYYALKDGLPEVEERALWTNGS- 249
            .:::|:.|||.:|.:.|.::|.||.:.:|.||.:...:. ||....:....|      .|..|| 
 Worm   198 CVMILMYFVPQMLLNFIGHMKLLTILCLFGNVIIFAAIVLITKELMVHTWYP------TWELGSV 256

  Fly   250 ----QLALFFGTAIFAFEGIALVMPLKNAMRKPHQFERPLGVLNVGMFLVSVMFMFAGSVGYMKW 310
                .::|..|..|::|||.|:|:|::|:::.|.......|||:..|.||:|::.|.|..||:.:
 Worm   257 TGIEGISLAAGALIYSFEGQAMVLPMENSLKYPKDMTGATGVLSTAMNLVTVLYAFLGFFGYVTF 321

  Fly   311 GEQVGGSLTLNLGDTILAQAVKLMVSAGVLLGYPLQFFVAIQIMWPNAKQMCGIEGRSLLGEL-- 373
            |..|.|||||||.::||..::|.::...:..|..:|.:|.:|::.|:.:.... |.|.::..|  
 Worm   322 GPAVQGSLTLNLPNSILTVSIKGLLVLKIFFGSAIQLYVIVQMLLPSLRSKIS-EDRKMVHRLLP 385

  Fly   374 -GFRTFMVLVTLAIAEMVPALGLFISLIGALCSTALALVFPPVIE-LISRSELNKGPGIWICVKN 436
             ..|..::|::|.||.:||.|...|.|:|......::|:.|..:: ::......|...::...:.
 Worm   386 YALRLGLMLISLCIALIVPNLMQIIPLVGITSGLLISLILPSFLDCMVFLPVFKKQGDMFKFYQK 450

  Fly   437 LVILV-LALLGFF---TGSYESLKQIVKH 461
            |:|.| |.:||:|   .|.|.|:..|:.:
 Worm   451 LIINVFLFVLGWFFLGAGLYSSIDDIINN 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16700NP_573191.1 SLC5-6-like_sbd 53..452 CDD:294310 116/422 (27%)
SdaC 57..452 CDD:223884 116/418 (28%)
slc-36.4NP_492453.1 Aa_trans 62..471 CDD:279788 119/447 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166140
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2463
OMA 1 1.010 - - QHG54358
OrthoDB 1 1.010 - - D284074at33208
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X121
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.810

Return to query results.
Submit another query.