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Protein Alignment CG8945 and Cpb2

DIOPT Version :9

Sequence 1:	NP_573190.1	Gene:	CG8945 / 32693	FlyBaseID:	FBgn0030815	Length:	1430	Species:	Drosophila melanogaster
Sequence 2:	NP_062749.2	Gene:	Cpb2 / 56373	MGIID:	1891837	Length:	422	Species:	Mus musculus

Alignment Length:	468	Identity:	132/468 - (28%)
Similarity:	223/468 - (47%)	Gaps:	87/468 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly   980 SYDKYQIWRLKPQDEEQVRALEEFKKGEDGVKLQWLKGPSLRGLTDVLVPPKMLVDF-------- 1036
            ::...|:....|:...||:.|:......:.|..|        .:|...:..|..|.|
Mouse    21 AFQSGQVLSALPRTSRQVQLLQNLTTTYEVVLWQ--------PVTAEFIEKKKEVHFFVNASDVD 77

  Fly  1037 --QGTLNYEGIAHEVLIFDVGKAIAYELTKEDYL--QTTRPS-KPRPTAPPPMTWNRYHNHDEIV 1096
              :..||...|...||:.:|          ||.:  ||...: .||.:|   ..:.:||:.:||.
Mouse    78 SVKAHLNVSRIPFNVLMNNV----------EDLIEQQTFNDTVSPRASA---SYYEQYHSLNEIY 129

  Fly  1097 KYLETVRMRHPQLVELIHIGRSFEGRPLIVVKIESKQTAAAANNDGLHTIKRPKRKRKSGQANAV 1161
            .::|.:..:||.:::.|:||.|||..||.|:|:..|:             :|.|        ||:
Mouse   130 SWIEVITEQHPDMLQKIYIGSSFEKYPLYVLKVSGKE-------------QRIK--------NAI 173

  Fly  1162 FVEAGAQGLAWIGPAAATWMIAELLRLMKTNKSNEDVEFIRNTTWYIMPVLNPDGYAYSHEYDRF 1226
            :::.|.....||.||...|.|..:.:.  ..|.|.....:|:..:|||||:|.|||.|:.:.:|.
Mouse   174 WIDCGIHAREWISPAFCLWFIGYVTQF--HGKENLYTRLLRHVDFYIMPVMNVDGYDYTWKKNRM 236

  Fly  1227 WKKSRSQHQTPPPSGLLDSAMTWLQQKRGPDKVCYGVDLDRNWL-YHWGKRGSSKAPCNEFYAGP 1290
            |:|:||.|:                     :..|.|.||:||:. .||.::|:|.:.|:|.|.|.
Mouse   237 WRKNRSAHK---------------------NNRCVGTDLNRNFASKHWCEKGASSSSCSETYCGL 280

  Fly  1291 APFSEPETKAVSEFLMDYRTQIKLYISLQAYGQVISYPVKANSTFNSERLDDFLDVAMVGTDGLR 1355
            .|.||||.|||::||......||.|||:.:|.|.|.:|.    ::|..:..|..::::|.::.:|
Mouse   281 YPESEPEVKAVADFLRRNIDHIKAYISMHSYSQQILFPY----SYNRSKSKDHEELSLVASEAVR 341

  Fly  1356 KKGS---KSRYKVDASNDLIEQRSGCADAFAAYEIGIPFSYTLQLADNGVHGYLLPSSAIEPTAR 1417
            ...|   .:||...:.::.:....|.:|.: .|::||.:|:|::|.|.|.:|:|||...|:||..
Mouse   342 AIESINKNTRYTHGSGSESLYLAPGGSDDW-IYDLGIKYSFTIELRDTGRYGFLLPERYIKPTCA 405

  Fly  1418 DAFEIISGMLDYI 1430
            :|...||.::.::
Mouse   406 EALAAISKIVWHV 418

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.