DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8945 and Cpb1

DIOPT Version :10

Sequence 1:NP_573190.1 Gene:CG8945 / 32693 FlyBaseID:FBgn0030815 Length:1430 Species:Drosophila melanogaster
Sequence 2:NP_036665.2 Gene:Cpb1 / 24271 RGDID:2391 Length:415 Species:Rattus norvegicus


Alignment Length:465 Identity:126/465 - (27%)
Similarity:220/465 - (47%) Gaps:89/465 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   981 YDKYQIWRLKPQDEEQVRALEEFKKGEDGVKLQWLKGPS---LRGLT--DVLVPPKMLVDFQGTL 1040
            :|..:::|:....|:.|..::|....::   :.:.|..|   ::.||  |..|..:.:.|.:..|
  Rat    20 FDGNRVYRVSVHGEDHVNLIQELANTKE---IDFWKPDSATQVKPLTTVDFHVKAEDVADVENFL 81

  Fly  1041 NYEGIAHEVLIFDVGKAIAYELTKEDYLQTTRPSKPRPTAPPPMTWNRYHNHDEIVKYLETVRMR 1105
            ....:.:||||.:|..|:     :..:...||.|        ..::.:|:..:.|..:::.|...
  Rat    82 EENEVHYEVLISNVRNAL-----ESQFDSHTRAS--------GHSYTKYNKWETIEAWIQQVATD 133

  Fly  1106 HPQLVELIHIGRSFEGRPLIVVKIESKQTAAAANNDGLHTIKRPKRKRKSGQANAVFVEAGAQGL 1170
            :|.||....||.:||||.:.|:||..               .||.:.       |:|::.|....
  Rat   134 NPDLVTQSVIGTTFEGRNMYVLKIGK---------------TRPNKP-------AIFIDCGFHAR 176

  Fly  1171 AWIGPAAATWMIAELLRLMKTNKSNEDV---EFIRNTTWYIMPVLNPDGYAYSHEYDRFWKKSRS 1232
            .||.||...|.:.|.:|..     |:::   :.:....:|::||:|.|||.|:...||.|:|:||
  Rat   177 EWISPAFCQWFVREAVRTY-----NQEIHMKQLLDELDFYVLPVVNIDGYVYTWTKDRMWRKTRS 236

  Fly  1233 QHQTPPPSGLLDSAMTWLQQKRGPDKVCYGVDLDRNWLYHWGKRGSSKAPCNEFYAGPAPFSEPE 1297
            .        :..|:             |.|||.:||:...|.:.|:|::||:|.|.||||.||.|
  Rat   237 T--------MAGSS-------------CLGVDPNRNFNAGWCEVGASRSPCSETYCGPAPESEKE 280

  Fly  1298 TKAVSEFLMDYRTQIKLYISLQAYGQVISYPVKANSTF--NSERLDDFLDVAMVGTDGLRKK--- 1357
            |||:::|:.:..:.||.|:::.:|.|::.||...:...  |.|.|:     |:|  .|..|:   
  Rat   281 TKALADFIRNNLSTIKAYLTIHSYSQMMLYPYSYDYKLPENYEELN-----ALV--KGAAKELAT 338

  Fly  1358 --GSKSRYKVDASNDLIEQRSGCADAFAAYEIGIPFSYTLQLADNGVHGYLLPSSAIEPTARDAF 1420
              |:|..|...|:.  |...:|.:|.: :|:.||.:|:|.:|.|.|..|:|||.|.|..|..:..
  Rat   339 LHGTKYTYGPGATT--IYPAAGGSDDW-SYDQGIKYSFTFELRDTGFFGFLLPESQIRQTCEETM 400

  Fly  1421 EIISGMLDYI 1430
            ..:..:.:|:
  Rat   401 LAVKYIANYV 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8945NP_573190.1 PHA03175 396..>525 CDD:177551
Propep_M14 987..1061 CDD:460505 18/78 (23%)
Peptidase_M14 1095..1421 CDD:459730 102/335 (30%)
Cpb1NP_036665.2 Propep_M14 26..102 CDD:460505 18/83 (22%)
M14_CPB 112..410 CDD:349443 103/355 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.