DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ubr1 and ubr1

DIOPT Version :9

Sequence 1:NP_001245723.1 Gene:Ubr1 / 32687 FlyBaseID:FBgn0030809 Length:1824 Species:Drosophila melanogaster
Sequence 2:XP_021323192.1 Gene:ubr1 / 568531 ZFINID:ZDB-GENE-091110-2 Length:1731 Species:Danio rerio


Alignment Length:1914 Identity:588/1914 - (30%)
Similarity:905/1914 - (47%) Gaps:313/1914 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 EWRLKRQAGTLDRSDIIEFLKRESPKYFDYQTSATVKDTNVITLKCMFKESLAKEEIIDVVVEFM 87
            :|:.....|    |.|:.:|..:.|..:..:          :.|:...:|...::.::..:..|:
Zfish    13 KWQEASNRG----SAILRYLGEQVPLIYCLE----------VELQHAEEELKVEQRLLYPLEYFL 63

  Fly    88 LGDNPSSALEKLRL--EGNTATVCGKVFKNGEPTYSCRECGVDPTCVLCVNCFKRSAHRFHKYKM 150
            .|:.|...||||:.  ..::|..||:|||.||..||||:|.:|||||||:.||::|.|:.|:|||
Zfish    64 FGEEPCVGLEKLQRYNSSSSAQQCGRVFKEGETVYSCRDCAIDPTCVLCIECFQKSVHKSHRYKM 128

  Fly   151 STSGGGGCCDCGDDEAWKKDQYCELHLANRKNPLESK--ILTDAVLERVEICFGAILAFCVSYLE 213
            ..|.|||.|||||.||||....|..|....:..:|:.  ::...:.||.::.|..:|.:....|.
Zfish   129 HASSGGGFCDCGDVEAWKTGPCCSQHDPGTEATMETDECVMDPGLQERAQMLFHLLLQYTTDMLI 193

  Fly   214 IEPNASL-QCLDGNVEGGQVDGAQYCTVLYNDESHTFDQVIQTLTKIAKCRAKDAMEIVAAIDRE 277
            .|.|..| :.|...|:    :.:.:| :|||||.|::|.||.||.:...|....|....|.||:|
Zfish   194 WEENNDLSEELKPKVK----EDSYFC-ILYNDEHHSYDHVIYTLQRAIACDQNQAQVYTALIDKE 253

  Fly   278 GRAVVKCDTFEECNKLKVSIENQMILPTSLVSTARNNQ-----SLRTSVLHIGAVACQQFALQLL 337
            ||..||..|...|.:.|.:|.             ||::     .||..|||...:|.|.|||:|.
Zfish   254 GRRAVKRGTLRTCQQAKDNIR-------------RNSEHIIQKPLRVEVLHTAVMAHQTFALRLG 305

  Fly   338 GWFQEFLVRHYLFRKTFSEL----VQRKQETFCIRHILEYDVKLWKTARTCWHRLLISGMLMEYD 398
            .|||:.:.....||..|.::    .....:...|..::.:|.||:|.||...|.|:...:||:.:
Zfish   306 AWFQKIIGYSVGFRDVFCQMALEPASDNDKLSLISRLMLHDAKLYKGARKVVHELIFCSLLMDTE 370

  Fly   399 NKMILAQEFSRRYATIVEDFISDDHDHAFSIVSLSVQLFTVPSIAHHLIAHEGIFDKLLHTFYHV 463
            .|...|.:|:..|..:.||||||||....||.:||||:||||::|..||....:...::.|...:
Zfish   371 YKRQFAMKFTEHYKQLQEDFISDDHQRNISITALSVQIFTVPTLARQLIEEGTVIKVIIDTVMDM 435

  Fly   464 AIEKFIRNKTLHFSKNIASLTFFKRANYILYDLRYLLSLKPDVLSNDLRNGFLEGCRALMRVLNV 528
            ..|....|...||..:.....|  |...|.:||||:|..||.:.:..||..||||.|..:..|..
Zfish   436 MREHLDNNHRFHFQGHNPDKFF--RVQVIFHDLRYILISKPSIWTEALRVKFLEGFRVFLHFLGC 498

  Fly   529 MQGMESMTRQTGQHMDYEPEWECAFNLHIKLATTISQVIDWASGDVKLLRKLYKMTMRALVSNSF 593
            |||||.:.||.|||::.|||||..|.|.::|...::...||.|.|.::|...::...|||:|   
Zfish   499 MQGMEEVKRQFGQHVEVEPEWEAGFTLQMQLRHILAMFQDWCSSDERVLLLAFQECHRALMS--- 560

  Fly   594 IVGGEKVMQPKK--VADHVANCLVYDISVQPVSIHLPLSRFFAGIYLHLGAHDLTYDGLQTETEA 656
            ........:||.  :...:.:...|.:|.:|||||||:||..||:|:           |..:|.|
Zfish   561 CTNQPFRSEPKDSYMCKQILHARPYKVSQEPVSIHLPISRLLAGLYV-----------LLCQTGA 614

  Fly   657 LS--------IKLTPREIIEPVLCTQAMIAQVGAGLWRRNGYTLLHQLYFYRNVRCRVEMLDRDI 713
            :.        .:|...|:.|..|....:.|||.|.:|||||.:|:.|:|:|::|:||.||.|:|:
Zfish   615 IQYLPDFVDPAQLNFTELAEQPLRCIVLAAQVCADMWRRNGLSLVSQVYYYQDVKCRDEMFDKDV 679

  Fly   714 ACLQIGASLMESNEFLIHVLNRFNTIPWLQENYWSLLSGN--EMNDDIIREAS-IFDEFLELLIV 775
            ..|||.||.|:.|.||:.||.||        ..:.:.:||  ..:.:::::.: :.:|.|.|||:
Zfish   680 IMLQIAASKMDPNHFLMLVLLRF--------ELFDIFNGNCSSKDQEVLKQWNRLTEEMLYLLII 736

  Fly   776 IIGERWMPGVSMVTEEDRLRKEIIQLLCIKPYSHSELSRALPDGNSGNSDNVFEEVINTVAVFKK 840
            |:|||::||:|.||:||.:.:|:|.||||:|.:||.|.::||:..  |.:...|.||..||.|||
Zfish   737 IVGERYVPGISNVTKEDVIMREVIHLLCIEPMAHSTLIKSLPENE--NHETGLETVIAKVANFKK 799

  Fly   841 PVGADSKGVYELKEHLLKEFNMYFYHYTKEDKSKAEELQRERRKAKKQLVCCPPPMLPKLTPAFT 905
            | |....|:|.:|:..|||||.:||||::...|||||.|:|||..:.......||:.|...|||:
Zfish   800 P-GVSGHGLYNVKKECLKEFNPFFYHYSRPQHSKAEEAQKERRSQESSEKALRPPVPPPFRPAFS 863

  Fly   906 PMANILQCPVFLNICSLIMERALNAYSRSFTESHLQKVLHLLGYAIQEEL-------SEHYPF-- 961
            .:.|:|.|.:|:::...|:::|:...|..:||..:|:.|||:|.|:.||.       :|...|  
Zfish   864 SIVNLLCCDIFIHVLRRILQKAVEDRSNQWTEPMIQRALHLVGQALLEETTQLENSSAEEVTFDF 928

  Fly   962 -LSFYERSQEYG--ILEKLEELARCPRLEAHYDFVLWTIERF---KQLQAKQAPSDGRAGPSCSQ 1020
             |...:...|.|  :|..|.::...|.|:...|.:.|.::.|   |.|:.|.:|:...|....  
Zfish   929 SLKAKKTGSEQGKSLLHFLTKMKSLPSLKVLKDMIAWNLQMFEVVKCLREKSSPAASFAMDHS-- 991

  Fly  1021 QGTGGKLSLSAEEQARE-ERENRARLAAERRAHIMAQMQKAQKSFISSNAEMFADTENETRKESA 1084
                     .|||..:: |::.:|..|...|..|||||...||:||.||..::     |...||:
Zfish   992 ---------KAEESVQDKEQKRKAEAAKAHRRKIMAQMSAMQKNFIESNKILY-----ENMPESS 1042

  Fly  1085 STGPMDWEDIPPEEEQGAVALESKV-------ACLGPDRKFYHGTDDTFKCILCFENCAISRGGR 1142
            |            :...|.:|:|.|       ..:||.:..:....:|..||||.|...:.....
Zfish  1043 S------------QSDTAASLDSFVMDVDKNRVAVGPQQGVWSLDWETLTCILCQEEQEVQAQAP 1095

  Fly  1143 QLVSSAFVQTSRV-----------------IFTTPNLRNSQSALHISCCGHVMHYSCWLEYFTNE 1190
            .:|.:|.||.|.|                 :|..|:|   ....|...|||.||.:||.:||  |
Zfish  1096 AMVLTACVQRSTVLTQSRGKTLSPKVDYYPLFMPPDL---AVGTHTGSCGHFMHATCWQKYF--E 1155

  Fly  1191 EFKELRRPHRNRAALAQAANVEFQCPYCRTLSNAIIPVTETLPAFSAPPSPN-ES------YLPL 1248
            ..:...|...:...:....|.|:.||.|::|.|.:||:   :|.  .|.|.| ||      :|.|
Zfish  1156 AVQSTTRNRLHAELIIDLENGEYMCPLCKSLCNTVIPL---IPV--EPSSLNYESAQLVGQHLTL 1215

  Fly  1249 DSFVEIMSTLAIELGNVKDHELTTLPSVSNILRLSGVVG-------------------GLAQFER 1294
            ..:::|||:                       |:.|:..                   |..:|..
Zfish  1216 MRWIQIMSS-----------------------RIRGLKAMWTADGSDAAEKAAAPFDEGQTEFRS 1257

  Fly  1295 SVQL-IKNPPRLHADYIEGIEFLKKALLNTMKIQQSHLKDHPAIESIEMVPIL-WDSCSYTLQAL 1357
            .:.. ::.||:......|.:      ::....:.:..|:. |..:....||.: |::|:||:||:
Zfish  1258 ILSFGVQEPPKFSRSITEML------VVCATTVHRVGLQT-PPNDLCPFVPAMSWNTCAYTIQAV 1315

  Fly  1358 EIYLYAVEKPLKAELSMRHQSCARNLVRACSRSSALEWETDLPLLPPMRSQAEFSSRLLDTIFNQ 1422
            |..|....|.|...|..|..|..:.||:.   |:|...:.:..::  .:..|:..:.|:.....:
Zfish  1316 ENMLQDEGKALFGSLKNRQLSGLKALVQF---SAAQRMKCNQVVI--QKHFADMLAVLVPVPHVE 1375

  Fly  1423 NDTSVLEWDCFRVLVPFQFGVLNLMVPEKGYKTIIPSG---SMFDFYIMQTMFLAQLTK------ 1478
            |..|:||.|.|.:||.....:.:|...|.  ..:.||.   :....|::|.:.:..:.:      
Zfish  1376 NTPSILEVDFFHLLVGLVLSIPSLYQEEA--VDLQPSAVSTAYNHLYLLQLITVGHMLQVLLAAH 1438

  Fly  1479 --AVLCFDVEKEKAKRAEKAPNSELTQLDYIEQLPSRIRDNMIDFYRRYNIPARVLQKTKQKQLV 1541
              ||:....|.::|:.|.:.       ...:.|...|::..::.|                    
Zfish  1439 DCAVMAVAEEGDEAQAAAEF-------FSTVSQHTDRMKSGVLSF-------------------- 1476

  Fly  1542 EEESEENQGHGQTVVIPCESHHLALLLEYVQRQMSSFLRCSCLFYRFLTDVDFPD--TFPTDQPD 1604
                                     .:|.|:|.:..||||:.||:..||.|..||  :...:.|:
Zfish  1477 -------------------------SVEGVKRGVLPFLRCAALFFNCLTGVPPPDELSVSAELPE 1516

  Fly  1605 -RFDLMCQYLGLDPMLGVYF-DMETVYATMMHSFASHPHIDR----EVEQRCQPDARRSLQVEPC 1663
             :..|:|.||.|...|...| |...|..|:::.:..:..|.:    |:.....|..|.       
Zfish  1517 SQLPLLCSYLSLPSNLFQLFQDHRDVMTTLINRWCGNTAISKALKGEMHMIRYPRKRN------- 1574

  Fly  1664 LRPLPRLKVLCDDFSDLINSVSDIFCPNNEREEMKTPTMCLICGLILCGQSYCCQPELGKVSVGA 1728
                 ||..|.:|:|.|:|..|...|||:..:|.|.||:||:||::||.||.||..:|....|||
Zfish  1575 -----RLIDLPEDYSVLLNQASHFKCPNSSDDERKHPTLCLLCGVMLCAQSSCCHEQLNGEEVGA 1634

  Fly  1729 CTHHAHACGAEVGIFLRIRDCQVVYL-GRGKGCFVPPPYLDEYGETDMGLRRGNPLRLSQAAYRK 1792
            ||.||..|||.||:|||:|:|::|.: .:.:|...|.||||:|||||..|.|||||.|....|||
Zfish  1635 CTGHAAICGAGVGLFLRVRECEIVLMASKTRGSPYPAPYLDDYGETDPQLGRGNPLHLCPERYRK 1699

  Fly  1793 IYLQWLGHGLHGEIARLNDNANVAAAAQW 1821
            :...|..|.:..||||..:..||....:|
Zfish  1700 LLHLWQQHCVLEEIARSLELLNVMFPFEW 1728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ubr1NP_001245723.1 zf-UBR 109..176 CDD:280386 41/66 (62%)
ClpS 236..301 CDD:280736 26/64 (41%)
ubr1XP_021323192.1 zf-UBR 87..154 CDD:308042 41/66 (62%)
ClpS 209..288 CDD:308309 30/96 (31%)
RING_Ubox 1077..1195 CDD:327409 36/125 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 56 1.000 Domainoid score I11006
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D34639at33208
OrthoFinder 1 1.000 - - FOG0001341
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101603
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1593
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.940

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