DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP15B and AGD4

DIOPT Version :9

Sequence 1:NP_573183.2 Gene:RhoGAP15B / 32686 FlyBaseID:FBgn0030808 Length:1552 Species:Drosophila melanogaster
Sequence 2:NP_001320312.1 Gene:AGD4 / 837629 AraportID:AT1G10870 Length:780 Species:Arabidopsis thaliana


Alignment Length:723 Identity:133/723 - (18%)
Similarity:243/723 - (33%) Gaps:225/723 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   479 EHIELRR----PPVDSAQLEE----LNRAAAAAEREESLLISAKNAEAETKTPKPERSDSWEFYG 535
            ||:.|.|    ..||..:.:|    .::||.:.::.....:|.|            ::...|...
plant   101 EHVLLERLMNFISVDLQEAKESRHRFDKAAHSYDQSREKFVSLK------------KNTRGEIVA 153

  Fly   536 EDENEEEDRDEEQEGSSSPEPLYANQEATYGKLFEMATAGSSRSNVLTPNQVAEQQQ----LACI 596
            |.|.:.|                 |.::|:.|         ||.|::......|.::    |..|
plant   154 ELEEDLE-----------------NSKSTFEK---------SRFNLVNSLMTIEAKKKYEFLESI 192

  Fly   597 TE--DSELDACEGAVGGVPLPQAVIEEFDPLSSKCSTLARSNKSNELLLLEHLLEEDTYGTVKAE 659
            :.  |:.|...:       |...::.:.:|...:..|.|:.:|....:..:.|.........::|
plant   193 SAIMDAHLRYFK-------LGYDLLNQLEPFIHQILTYAQQSKEQSKIEQDRLARRIQEFRTQSE 250

  Fly   660 QDDVSMCTSEEEPTTSAATSPKPQQPQIVHQNARLLSDSMENMLDSDQERAKP-YLSRMPESANK 723
            .|...:..:.|    |:..:.......|.::|.       |..|.:|:|..|. ||         
plant   251 LDSQQLVANAE----SSGANGNRVGGNIPYKNT-------ETSLTADKEVIKQGYL--------- 295

  Fly   724 ASGPVDLASASRNRTNW----FVPDK-ASCSDVTPNTSKTTPPIEGDSPPTYLEAIGGSKDAAGN 783
                  |..:|..||:|    ||.|. .|......|.:|               ::|.....:|:
plant   296 ------LKRSSSLRTDWKRKFFVLDSHGSMYYYRTNGNK---------------SMGSHHHYSGS 339

  Fly   784 QENRSTIGSRFRQTIN---AISNVKLKMDAMKRKASFRGANQRQSDVRVALQMV-PRPSLSPLLI 844
            .::.:.:..|||...|   :::...|..:.:..:.|....:....|:|:..::: |:.:.:   :
plant   340 SDHNTGVFGRFRARHNRSGSLTEGSLGYNTIDLRTSLIKLDAEDMDLRLCFRIISPQKTYT---L 401

  Fly   845 RYEGPLVRFPSGVVEDILKEMQNRKAILRERQF-----QTFLDQEMKT----------------- 887
            :.|....|.      |.:.::......|....|     ..:||::..:                 
plant   402 QAENGADRM------DWVNKITKAIGTLLNSHFLQQSPVRYLDKDNSSSAPANAVVSGDQIRHND 460

  Fly   888 PREMIPLDTITTLQCVSNSRVTDTATHFYCFEITTSQPKNGNGAGDAMSSNPNLLMTSSSSGNVK 952
            .|:.|..|..|.|:.:..:..        |.|....:|       |..|.|..:|:....|| |.
plant   461 SRQNIGDDVSTILRGLPGNNA--------CAECNAPEP-------DWASLNLGVLLCIQCSG-VH 509

  Fly   953 QQRVSHLYGVGKES-ERGVWMQKILESLTNSLPVKYTCHYYRAGWCYLKNSITSEWSGTWLVLRK 1016
            :....|:..|...| :..||...||:...|...|          :|   ||:   |.|   :|..
plant   510 RNLGVHISKVRSLSLDVKVWEPTILDLFRNLGNV----------YC---NSL---WEG---LLHL 555

  Fly  1017 SQRRLIFVSE-----ANGNV------------EKMDLRK--ARCIVLKESDESIDNLHVESGPML 1062
            ....:.|.||     ::.:|            ||..|.|  .:.:|:|  |||..||...|    
plant   556 DDDCVAFCSEDGSALSHASVSKPCPEDSFSVKEKYILGKYLEKALVIK--DESEANLSAAS---- 614

  Fly  1063 MIDCPPYAVYMIMSSARETKIWRHIIREVAHNNGFSLGDQQL--TRYDVPVIVDKCINFVYIHGS 1125
                   .::..:.|....:|:|.|:         :.||..:  |::|....:|     .|.|..
plant   615 -------RIWEAVQSRNIREIYRLIV---------TTGDVNIINTKFDDITDID-----AYHHID 658

  Fly  1126 MSEGIYRK 1133
            .:|...:|
plant   659 AAEKAVKK 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP15BNP_573183.2 RhoGAP_ARAP 1095..1277 CDD:239850 9/41 (22%)
AGD4NP_001320312.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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